RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 COPS5Q92905 334 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 IWS1Q96ST2 819 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 PPP1R12CQ9BZL4 782 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 RIOX1Q9H6W3 641 aa18.38■□□□□ 0.53
CDPF1-205ENST00000474256 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
CDPF1-205ENST00000474256 A6NJR5 290 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 ARIH2O95376 493 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 HSD17B4P51659 736 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 WTAPQ15007 396 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 SART3Q15020 963 aaKnown RBP18.37■□□□□ 0.53
CDPF1-205ENST00000474256 CCDC62Q6P9F0 684 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 MB21D2Q8IYB1 491 aaPredicted RBP18.37■□□□□ 0.53
CDPF1-205ENST00000474256 IGDCC4Q8TDY8 1250 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 RMDN3Q96TC7 470 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDPF1-205ENST00000474256 TRPV6Q9H1D0 765 aa18.37■□□□□ 0.53
CDPF1-205ENST00000474256 ALDH8A1Q9H2A2 487 aaPredicted RBP18.37■□□□□ 0.53
CDPF1-205ENST00000474256 MAP3K20Q9NYL2 800 aaKnown RBP18.37■□□□□ 0.53
CDPF1-205ENST00000474256 CFBP00751 764 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 MYL3P08590 195 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 LAMA2P24043 3122 aaKnown RBP18.36■□□□□ 0.53
CDPF1-205ENST00000474256 CYP2C18P33260 490 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 STXBP2Q15833 593 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
CDPF1-205ENST00000474256 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
CDPF1-205ENST00000474256 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
CDPF1-205ENST00000474256 HIPK3Q9H422 1215 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 PCDHA1Q9Y5I3 950 aa18.36■□□□□ 0.53
CDPF1-205ENST00000474256 UMODL1Q5DID0 1318 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 CYTH3O43739 400 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 KPNA6O60684 536 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 RASIP1Q5U651 963 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 ARHGEF16Q5VV41 709 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 SEPT14Q6ZU15 432 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 FAM161BQ96MY7 647 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 PIGSQ96S52 555 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 NOC4LQ9BVI4 516 aaKnown RBP18.35■□□□□ 0.53
CDPF1-205ENST00000474256 SEMA6BQ9H3T3 888 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 GPHNQ9NQX3 736 aaPredicted RBP18.35■□□□□ 0.53
CDPF1-205ENST00000474256 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
CDPF1-205ENST00000474256 COL6A3P12111 3177 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 EIF3JO75822 258 aaKnown RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 NR3C2P08235 984 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 EIF2AK2P19525 551 aaKnown RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 TRAF1Q13077 416 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 PSRC1Q6PGN9 363 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 HOMER1Q86YM7 354 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 MTA3Q9BTC8 594 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 TTYH1Q9H313 450 aaPredicted RBP18.34■□□□□ 0.53
CDPF1-205ENST00000474256 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
CDPF1-205ENST00000474256 TMEM265A0A087WTH1 108 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 PNMA6FA0A0J9YX94 578 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 ACRP10323 421 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 NBPF20Q3BBV1 942 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 LY9Q9HBG7 655 aa18.33■□□□□ 0.52
CDPF1-205ENST00000474256 TRMT13Q9NUP7 481 aaKnown RBP18.33■□□□□ 0.52
CDPF1-205ENST00000474256 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.52
CDPF1-205ENST00000474256 GH1P01241 217 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 ARHGAP1Q07960 439 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 NFRKBQ6P4R8 1299 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-205ENST00000474256 AFG1LQ8WV93 481 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 CDX2Q99626 313 aaPredicted RBP18.32■□□□□ 0.52
CDPF1-205ENST00000474256 PDCD2LQ9BRP1 358 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 WNT8AQ9H1J5 351 aa18.32■□□□□ 0.52
CDPF1-205ENST00000474256 SLC27A2O14975 620 aa18.31■□□□□ 0.52
CDPF1-205ENST00000474256 MMP3P08254 477 aa18.31■□□□□ 0.52
CDPF1-205ENST00000474256 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-205ENST00000474256 CCL23P55773 120 aa18.31■□□□□ 0.52
CDPF1-205ENST00000474256 PTPN11Q06124 597 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-205ENST00000474256 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
CDPF1-205ENST00000474256 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
CDPF1-205ENST00000474256 EMID1Q96A84 441 aaPredicted RBP18.31■□□□□ 0.52
CDPF1-205ENST00000474256 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
CDPF1-205ENST00000474256 PRC1O43663 620 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 RGS20O76081 388 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 DDAH1O94760 285 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 POLR2MP0CAP2 368 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 CYP2C9P11712 490 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 SMARCA1P28370 1054 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 MCM5P33992 734 aa18.3■□□□□ 0.52
CDPF1-205ENST00000474256 COL9A3Q14050 684 aaPredicted RBP18.3■□□□□ 0.52
CDPF1-205ENST00000474256 PGM5Q15124 567 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms