RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ERLIN2O94905 339 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 SLU7O95391 586 aaKnown RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 COPB2P35606 906 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 FLT3P36888 993 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 EVA1CP58658 441 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 TUBB4BP68371 445 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 IFT88Q13099 833 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 IQCB1Q15051 598 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 TMCO3Q6UWJ1 677 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 MICALCLQ6ZW33 695 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 CATIPQ7Z7H3 387 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 SPATS2Q86XZ4 545 aaKnown RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 SULF2Q8IWU5 870 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 SVOPQ8N4V2 548 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 MICAL1Q8TDZ2 1067 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 RHOVQ96L33 236 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 KCND1Q9NSA2 647 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 LMBRD1Q9NUN5 540 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 LCMT1Q9UIC8 334 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 FHOD1Q9Y613 1164 aa8.27□□□□□ -1.09
GPNMB-209ENST00000474157 ATXN2Q99700 1313 aaKnown RBP8.27□□□□□ -1.09
GPNMB-209ENST00000474157 KIF1BO60333 1816 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 NEXMIFQ5QGS0 1516 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 DLC1Q96QB1 1528 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 ZSCAN9O15535 394 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-209ENST00000474157 AHCYL1O43865 530 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 HMMRO75330 724 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 PNMA6AP0CW24 399 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-209ENST00000474157 NID1P14543 1247 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 NAT1P18440 290 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 NME2P22392 152 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 GPTP24298 496 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 HNRNPH1P31943 449 aaKnown RBP8.26□□□□□ -1.09
GPNMB-209ENST00000474157 DGKGP49619 791 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 RHBDL3P58872 404 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 COL9A3Q14050 684 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-209ENST00000474157 SLC15A2Q16348 729 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 CCDC38Q502W7 563 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 WLSQ5T9L3 541 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 RASIP1Q5U651 963 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 MFN1Q8IWA4 741 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 FAM76AQ8TAV0 307 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
GPNMB-209ENST00000474157 STK35Q8TDR2 534 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 LZICQ8WZA0 190 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 OSBPL9Q96SU4 736 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 UNC45AQ9H3U1 944 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 TMOD4Q9NZQ9 345 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 ADAMTS1Q9UHI8 967 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 ATP8A1Q9Y2Q0 1164 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 SAMM50Q9Y512 469 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 RPGRIP1LQ68CZ1 1315 aa8.26□□□□□ -1.09
GPNMB-209ENST00000474157 PLCH1Q4KWH8 1693 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 SHTN1A0MZ66 631 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 GOLGA6L9A6NEM1 432 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 A6NNZ2 444 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 FSCN2O14926 492 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 ERC2O15083 957 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 PF4P02776 101 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 BMP6P22004 513 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 GJA8P48165 433 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 ARL4DP49703 201 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 GSTM4Q03013 218 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 C19orf57Q0VDD7 668 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 PDE3AQ14432 1141 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 POSTNQ15063 836 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 TUBB8Q3ZCM7 444 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 SOGA3Q5TF21 947 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 SPATA21Q7Z572 469 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 MYLK4Q86YV6 388 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 FAM114A1Q8IWE2 563 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 DMRTC2Q8IXT2 367 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 DNAJC5GQ8N7S2 189 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 GBP7Q8N8V2 638 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 MAB21L3Q8N8X9 362 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 KCNB2Q92953 911 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 WNT8BQ93098 351 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 JAKMIP2Q96AA8 810 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 BICD1Q96G01 975 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 CABS1Q96KC9 395 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 IRF2BPLQ9H1B7 796 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 RWDD1Q9H446 243 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 SOX17Q9H6I2 414 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 CBX8Q9HC52 389 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 RGL1Q9NZL6 768 aa8.25□□□□□ -1.09
GPNMB-209ENST00000474157 BARX2Q9UMQ3 279 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-209ENST00000474157 RREB1Q92766 1687 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 THSD7AQ9UPZ6 1657 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 NUP188Q5SRE5 1749 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 F8VZ95 297 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 PPFIA4O75335 1185 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 HOXB4P17483 251 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms