RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CTNND1O60716 968 aaKnown RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 FLOT1O75955 427 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 VCAM1P19320 739 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 MCM6Q14566 821 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 HS1BP3Q53T59 392 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 CNKSR2Q8WXI2 1034 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 HOOK2Q96ED9 719 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 NAP1L5Q96NT1 182 aaPredicted RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 SH2D4AQ9H788 454 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 RAVER2Q9HCJ3 691 aaKnown RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 ZHX2Q9Y6X8 837 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 NFIBO00712 420 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 SERPINC1P01008 464 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 HMGCS2P54868 508 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 GOLGA8FQ08AF8 430 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 GOLGA8DPQ0D2H9 430 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 TMEM266Q2M3C6 531 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 TMC6Q7Z403 805 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 MLKLQ8NB16 471 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 CACTINQ8WUQ7 758 aaKnown RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 CRYGNQ8WXF5 182 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 LENG9Q96B70 501 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 EEF2KMTQ96G04 330 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 CCDC34Q96HJ3 373 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 PURBQ96QR8 312 aaKnown RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 RPAP3Q9H6T3 665 aaPredicted RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 BLOC1S4Q9NUP1 217 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 CCPG1Q9ULG6 757 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 PCDHA12Q9UN75 941 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 ZNF536O15090 1300 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 TRIM49BA6NDI0 452 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 KLRC4O43908 158 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 PEX10O60683 326 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 ALAS1P13196 640 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 FXR2P51116 673 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLK1-210ENST00000473565 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 APOBEC3FQ8IUX4 373 aaKnown RBP7.01□□□□□ -1.29
CLK1-210ENST00000473565 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 AK8Q96MA6 479 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 GSDMAQ96QA5 445 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 KBTBD4Q9NVX7 518 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 COL20A1Q9P218 1284 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 FEM1BQ9UK73 627 aa7.01□□□□□ -1.29
CLK1-210ENST00000473565 SYNRGQ9UMZ2 1314 aa7□□□□□ -1.29
CLK1-210ENST00000473565 DOCK1Q14185 1865 aa7□□□□□ -1.29
CLK1-210ENST00000473565 PCNTO95613 3336 aa7□□□□□ -1.29
CLK1-210ENST00000473565 POTEB3A0JP26 581 aa7□□□□□ -1.29
CLK1-210ENST00000473565 POTECB2RU33 542 aa7□□□□□ -1.29
CLK1-210ENST00000473565 SSBP05455 408 aaKnown RBP eCLIP7□□□□□ -1.29
CLK1-210ENST00000473565 PTPRAP18433 802 aa7□□□□□ -1.29
CLK1-210ENST00000473565 ZNF76P36508 570 aa7□□□□□ -1.29
CLK1-210ENST00000473565 SREBF1P36956 1147 aa7□□□□□ -1.29
CLK1-210ENST00000473565 MMP14P50281 582 aa7□□□□□ -1.29
CLK1-210ENST00000473565 ASIC1P78348 528 aa7□□□□□ -1.29
CLK1-210ENST00000473565 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
CLK1-210ENST00000473565 AP3B2Q13367 1082 aa7□□□□□ -1.29
CLK1-210ENST00000473565 MUM1L1Q5H9M0 696 aa7□□□□□ -1.29
CLK1-210ENST00000473565 POTEBQ6S5H4 581 aa7□□□□□ -1.29
CLK1-210ENST00000473565 MOB2Q70IA6 237 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CREBRFQ8IUR6 639 aa7□□□□□ -1.29
CLK1-210ENST00000473565 SCYL3Q8IZE3 742 aa7□□□□□ -1.29
CLK1-210ENST00000473565 TRIML1Q8N9V2 468 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CALML4Q96GE6 196 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CDK5RAP3Q96JB5 506 aa7□□□□□ -1.29
CLK1-210ENST00000473565 SLF1Q9BQI6 1058 aa7□□□□□ -1.29
CLK1-210ENST00000473565 KIAA1683Q9H0B3 1180 aa7□□□□□ -1.29
CLK1-210ENST00000473565 KCNMB3Q9NPA1 279 aa7□□□□□ -1.29
CLK1-210ENST00000473565 INTS13Q9NVM9 706 aa7□□□□□ -1.29
CLK1-210ENST00000473565 PKD2L1Q9P0L9 805 aa7□□□□□ -1.29
CLK1-210ENST00000473565 SYNPO2Q9UMS6 1093 aa7□□□□□ -1.29
CLK1-210ENST00000473565 MYMKA6NI61 221 aa7□□□□□ -1.29
CLK1-210ENST00000473565 E9PMD0 336 aa7□□□□□ -1.29
CLK1-210ENST00000473565 MEIS1O00470 390 aa7□□□□□ -1.29
CLK1-210ENST00000473565 WDR46O15213 610 aaKnown RBP7□□□□□ -1.29
CLK1-210ENST00000473565 MSH4O15457 936 aa7□□□□□ -1.29
CLK1-210ENST00000473565 FCER1AP12319 257 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CLCN1P35523 988 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CCT6AP40227 531 aaKnown RBP7□□□□□ -1.29
CLK1-210ENST00000473565 PRCPP42785 496 aa7□□□□□ -1.29
CLK1-210ENST00000473565 UBASH3AP57075 661 aa7□□□□□ -1.29
CLK1-210ENST00000473565 TPM4P67936 248 aa7□□□□□ -1.29
CLK1-210ENST00000473565 CACNB1Q02641 598 aaPredicted RBP7□□□□□ -1.29
CLK1-210ENST00000473565 KRT79Q5XKE5 535 aa7□□□□□ -1.29
CLK1-210ENST00000473565 DCAF15Q66K64 600 aa7□□□□□ -1.29
CLK1-210ENST00000473565 NCAPH2Q6IBW4 605 aa7□□□□□ -1.29
CLK1-210ENST00000473565 FAM160B2Q86V87 743 aa7□□□□□ -1.29
CLK1-210ENST00000473565 ATG4CQ96DT6 458 aa7□□□□□ -1.29
CLK1-210ENST00000473565 WDR18Q9BV38 432 aa7□□□□□ -1.29
CLK1-210ENST00000473565 TRIM9Q9C026 710 aa7□□□□□ -1.29
CLK1-210ENST00000473565 POLD4Q9HCU8 107 aa7□□□□□ -1.29
CLK1-210ENST00000473565 PICK1Q9NRD5 415 aa7□□□□□ -1.29
CLK1-210ENST00000473565 POTEFA5A3E0 1075 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
CLK1-210ENST00000473565 CHMP2AO43633 222 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 POLR2MP0CAP2 368 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 POTEIP0CG38 1075 aa6.99□□□□□ -1.29
CLK1-210ENST00000473565 CDK11BP21127 795 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms