RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
A1CF-209ENST00000473480 TMEM40Q8WWA1 233 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 UBE2FQ969M7 185 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 ATG4CQ96DT6 458 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 MPHOSPH9Q99550 1183 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 CNNM2Q9H8M5 875 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
A1CF-209ENST00000473480 CCNL1Q9UK58 526 aaPredicted RBP9.8□□□□□ -0.84
A1CF-209ENST00000473480 MEIS3P2A8K0S8 358 aa9.79□□□□□ -0.84
A1CF-209ENST00000473480 IMPDH2P12268 514 aa9.79□□□□□ -0.84
A1CF-209ENST00000473480 NLRC3Q7RTR2 1065 aa9.79□□□□□ -0.84
A1CF-209ENST00000473480 DTWD2Q8NBA8 298 aa9.79□□□□□ -0.84
A1CF-209ENST00000473480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.79□□□□□ -0.84
A1CF-209ENST00000473480 TRIT1Q9H3H1 467 aaKnown RBP9.79□□□□□ -0.84
A1CF-209ENST00000473480 C14orf93Q9H972 538 aaKnown RBP9.79□□□□□ -0.84
A1CF-209ENST00000473480 MBNL3Q9NUK0 354 aaKnown RBP9.79□□□□□ -0.84
A1CF-209ENST00000473480 ABCC6O95255 1503 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 GLTPD2A6NH11 291 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 UBOX5O94941 541 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 RNASE1P07998 156 aaKnown RBP9.78□□□□□ -0.84
A1CF-209ENST00000473480 CCNFP41002 786 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 SPATA32Q96LK8 384 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 ADAMTS6Q9UKP5 1117 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 ZNRF3Q9ULT6 936 aa9.78□□□□□ -0.84
A1CF-209ENST00000473480 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
A1CF-209ENST00000473480 RNF4P78317 190 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 RAD51AP2Q09MP3 1159 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 PAK2Q13177 524 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 TMPRSS7Q7RTY8 843 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 FERD3LQ96RJ6 166 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 GPR62Q9BZJ7 368 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 CARS2Q9HA77 564 aaKnown RBP9.77□□□□□ -0.85
A1CF-209ENST00000473480 RC3H2Q9HBD1 1191 aaKnown RBP9.77□□□□□ -0.85
A1CF-209ENST00000473480 GPATCH2Q9NW75 528 aa9.77□□□□□ -0.85
A1CF-209ENST00000473480 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.77□□□□□ -0.85
A1CF-209ENST00000473480 N4BP2Q86UW6 1770 aaPredicted RBP9.76□□□□□ -0.85
A1CF-209ENST00000473480 PPIP5K1Q6PFW1 1433 aa9.76□□□□□ -0.85
A1CF-209ENST00000473480 SPATA31E1Q6ZUB1 1445 aa9.76□□□□□ -0.85
A1CF-209ENST00000473480 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
A1CF-209ENST00000473480 NME1P15531 152 aaKnown RBP9.76□□□□□ -0.85
A1CF-209ENST00000473480 COL9A2Q14055 689 aaPredicted RBP9.76□□□□□ -0.85
A1CF-209ENST00000473480 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
A1CF-209ENST00000473480 DUSP15Q9H1R2 295 aaPredicted RBP9.76□□□□□ -0.85
A1CF-209ENST00000473480 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
A1CF-209ENST00000473480 BIN1O00499 593 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 LRRN2O75325 713 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 SRFP11831 508 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 POLR2BP30876 1174 aaKnown RBP9.75□□□□□ -0.85
A1CF-209ENST00000473480 SLC17A8Q8NDX2 589 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 VWCEQ96DN2 955 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 PRDM7Q9NQW5 492 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 PODXL2Q9NZ53 605 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 LY75O60449 1722 aa9.75□□□□□ -0.85
A1CF-209ENST00000473480 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 TNFRSF10CO14798 259 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 JUNBP17275 347 aaPredicted RBP9.74□□□□□ -0.85
A1CF-209ENST00000473480 ITGB5P18084 799 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 TPP2P29144 1249 aaPredicted RBP9.74□□□□□ -0.85
A1CF-209ENST00000473480 SOX10P56693 466 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 DEFB115Q30KQ5 88 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 RGL3Q3MIN7 710 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 LRRN4CLQ8ND94 238 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 GPRASP2Q96D09 838 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 TGIF2Q9GZN2 237 aa9.74□□□□□ -0.85
A1CF-209ENST00000473480 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
A1CF-209ENST00000473480 SBF1O95248 1867 aa9.73□□□□□ -0.85
A1CF-209ENST00000473480 CLEC3AO75596 197 aa9.73□□□□□ -0.85
A1CF-209ENST00000473480 ATG4DQ86TL0 474 aaPredicted RBP9.73□□□□□ -0.85
A1CF-209ENST00000473480 RASGRP4Q8TDF6 673 aa9.73□□□□□ -0.85
A1CF-209ENST00000473480 ACEP12821 1306 aa9.73□□□□□ -0.85
A1CF-209ENST00000473480 WDR33Q9C0J8 1336 aaKnown RBP9.73□□□□□ -0.85
A1CF-209ENST00000473480 POLR3AO14802 1390 aaPredicted RBP9.73□□□□□ -0.85
A1CF-209ENST00000473480 ARFGEF1Q9Y6D6 1849 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 USP54Q70EL1 1684 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 PAX4O43316 350 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 IL2RBP14784 551 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 DPEP1P16444 411 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 GAB4Q2WGN9 574 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 NBPF12Q5TAG4 269 aaPredicted RBP9.72□□□□□ -0.85
A1CF-209ENST00000473480 FBXW10Q5XX13 1052 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
A1CF-209ENST00000473480 TSPYL5Q86VY4 417 aaPredicted RBP9.72□□□□□ -0.85
A1CF-209ENST00000473480 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
A1CF-209ENST00000473480 GINM1Q9NU53 330 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 PPT2Q9UMR5 302 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
A1CF-209ENST00000473480 KIAA1551Q9HCM1 1747 aa9.71□□□□□ -0.85
A1CF-209ENST00000473480 RASSF10A6NK89 507 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 ESR1P03372 595 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 GJA8P48165 433 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 CREG2Q8IUH2 290 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 RBBP8NLQ8NC74 664 aaPredicted RBP9.71□□□□□ -0.86
A1CF-209ENST00000473480 CCDC120Q96HB5 630 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 SLC9A7Q96T83 725 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 TM9SF2Q99805 663 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 EFR3BQ9Y2G0 817 aa9.71□□□□□ -0.86
A1CF-209ENST00000473480 WASH4PA8MWX3 477 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 SOX9P48436 509 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms