RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 OPLAHO14841 1288 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 PPP1R11O60927 126 aaPredicted RBP24.13■■□□□ 1.45
EPHB3-202ENST00000473079 HSD17B4P51659 736 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 EPHB4P54760 987 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 NECTIN1Q15223 517 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 SLC35G1Q2M3R5 365 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 CATIPQ7Z7H3 387 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 DEFB123Q8N688 67 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 PCDHA1Q9Y5I3 950 aa24.13■■□□□ 1.45
EPHB3-202ENST00000473079 A6NJR5 290 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 TTLL4Q14679 1199 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 STXBP2Q15833 593 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 BRDTQ58F21 947 aaPredicted RBP24.12■■□□□ 1.45
EPHB3-202ENST00000473079 CCDC62Q6P9F0 684 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 TMTC2Q8N394 836 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 OR6J1Q8NGC5 347 aa24.12■■□□□ 1.45
EPHB3-202ENST00000473079 SLC27A2O14975 620 aa24.11■■□□□ 1.45
EPHB3-202ENST00000473079 CYTH3O43739 400 aa24.11■■□□□ 1.45
EPHB3-202ENST00000473079 KPNA6O60684 536 aa24.11■■□□□ 1.45
EPHB3-202ENST00000473079 TXNP10599 105 aaKnown RBP24.11■■□□□ 1.45
EPHB3-202ENST00000473079 PURAQ00577 322 aaKnown RBP24.11■■□□□ 1.45
EPHB3-202ENST00000473079 LY9Q9HBG7 655 aa24.11■■□□□ 1.45
EPHB3-202ENST00000473079 PNMA6FA0A0J9YX94 578 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 EIF3JO75822 258 aaKnown RBP24.1■■□□□ 1.45
EPHB3-202ENST00000473079 CFBP00751 764 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 MCM5P33992 734 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 ARHGEF16Q5VV41 709 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 TMEM87BQ96K49 555 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 PIGSQ96S52 555 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 MTMR10Q9NXD2 777 aa24.1■■□□□ 1.45
EPHB3-202ENST00000473079 PRC1O43663 620 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 DDAH1O94760 285 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 SMARCA1P28370 1054 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 CREB3L3Q68CJ9 461 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 CASC1Q6TDU7 716 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 MTG1Q9BT17 334 aaPredicted RBP24.09■■□□□ 1.45
EPHB3-202ENST00000473079 PXMP2Q9NR77 195 aa24.09■■□□□ 1.45
EPHB3-202ENST00000473079 ARIH2O95376 493 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 NR3C2P08235 984 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 PSMC6P62333 389 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 SMAD3P84022 425 aaKnown RBP24.08■■□□□ 1.45
EPHB3-202ENST00000473079 PPIGQ13427 754 aaKnown RBP eCLIP24.08■■□□□ 1.45
EPHB3-202ENST00000473079 Q7L0L9 218 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 HOMER1Q86YM7 354 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 ZNF654Q8IZM8 581 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 TMEM199Q8N511 208 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 COPS5Q92905 334 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 ANO2Q9NQ90 1003 aa24.08■■□□□ 1.45
EPHB3-202ENST00000473079 GPHNQ9NQX3 736 aaPredicted RBP24.08■■□□□ 1.45
EPHB3-202ENST00000473079 MYL3P08590 195 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 KIF5BP33176 963 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 LIFRP42702 1097 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 SKAP1Q86WV1 359 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 RNPC3Q96LT9 517 aaKnown RBP24.07■■□□□ 1.44
EPHB3-202ENST00000473079 LZTS2Q9BRK4 669 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 SPZ1Q9BXG8 430 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 TRPV6Q9H1D0 765 aa24.07■■□□□ 1.44
EPHB3-202ENST00000473079 ALDH8A1Q9H2A2 487 aaPredicted RBP24.07■■□□□ 1.44
EPHB3-202ENST00000473079 LAMA2P24043 3122 aaKnown RBP24.06■■□□□ 1.44
EPHB3-202ENST00000473079 SH2B2O14492 632 aaPredicted RBP24.06■■□□□ 1.44
EPHB3-202ENST00000473079 B4GALT4O60513 344 aa24.06■■□□□ 1.44
EPHB3-202ENST00000473079 EIF2AK2P19525 551 aaKnown RBP24.06■■□□□ 1.44
EPHB3-202ENST00000473079 SEPT14Q6ZU15 432 aa24.06■■□□□ 1.44
EPHB3-202ENST00000473079 C16orf59Q7L2K0 433 aa24.06■■□□□ 1.44
EPHB3-202ENST00000473079 CTCFLQ8NI51 663 aaPredicted RBP24.06■■□□□ 1.44
EPHB3-202ENST00000473079 PDCD2LQ9BRP1 358 aa24.06■■□□□ 1.44
EPHB3-202ENST00000473079 GCOM1H8Y6P7 765 aaPredicted RBP24.05■■□□□ 1.44
EPHB3-202ENST00000473079 GH1P01241 217 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 SUPT20HL2P0C7V6 817 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 POLR2MP0CAP2 368 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 ARHGAP1Q07960 439 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 VSIG10LQ86VR7 867 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 PPP1R12CQ9BZL4 782 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 HIPK3Q9H422 1215 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 DDX41Q9UJV9 622 aaKnown RBP24.05■■□□□ 1.44
EPHB3-202ENST00000473079 MYH6P13533 1939 aa24.05■■□□□ 1.44
EPHB3-202ENST00000473079 CSF2RAP15509 400 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 CYP2C18P33260 490 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 GNAQP50148 359 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 LY6KQ17RY6 165 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 RNF20Q5VTR2 975 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 NFRKBQ6P4R8 1299 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 EMID1Q96A84 441 aaPredicted RBP24.04■■□□□ 1.44
EPHB3-202ENST00000473079 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.04■■□□□ 1.44
EPHB3-202ENST00000473079 NOC4LQ9BVI4 516 aaKnown RBP24.04■■□□□ 1.44
EPHB3-202ENST00000473079 STXBP5LQ9Y2K9 1186 aa24.04■■□□□ 1.44
EPHB3-202ENST00000473079 CCDC69A6NI79 296 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 CALM1P0DP23 149 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 CALM2P0DP24 149 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 CALM3P0DP25 149 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 HOXA13P31271 388 aaPredicted RBP24.03■■□□□ 1.44
EPHB3-202ENST00000473079 PTPN11Q06124 597 aaPredicted RBP24.03■■□□□ 1.44
EPHB3-202ENST00000473079 COL9A3Q14050 684 aaPredicted RBP24.03■■□□□ 1.44
EPHB3-202ENST00000473079 PGM5Q15124 567 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 NBPF20Q3BBV1 942 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 TSGA10IPQ3SY00 556 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 TMEM240Q5SV17 173 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 KCNV1Q6PIU1 500 aa24.03■■□□□ 1.44
EPHB3-202ENST00000473079 CDC45O75419 566 aa24.02■■□□□ 1.44
EPHB3-202ENST00000473079 RASIP1Q5U651 963 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms