RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 SYT3Q9BQG1 590 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 UBP1Q9NZI7 540 aa6.58□□□□□ -1.36
CTSS-203ENST00000472977 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
CTSS-203ENST00000472977 R3HDM1Q15032 1099 aaKnown RBP6.57□□□□□ -1.36
CTSS-203ENST00000472977 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
CTSS-203ENST00000472977 EEF1DP3Q658K8 133 aa6.57□□□□□ -1.36
CTSS-203ENST00000472977 PALM2Q8IXS6 379 aa6.57□□□□□ -1.36
CTSS-203ENST00000472977 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
CTSS-203ENST00000472977 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 GPR42O15529 346 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 CD247P20963 164 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 SELENOPP49908 381 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 ZNF585AQ6P3V2 769 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 ETV3LQ6ZN32 361 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 CIR1Q86X95 450 aaPredicted RBP6.56□□□□□ -1.36
CTSS-203ENST00000472977 ZDHHC15Q96MV8 337 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 NOL6Q9H6R4 1146 aaKnown RBP6.56□□□□□ -1.36
CTSS-203ENST00000472977 MRS2Q9HD23 443 aa6.56□□□□□ -1.36
CTSS-203ENST00000472977 LTBP3Q9NS15 1303 aa6.55□□□□□ -1.36
CTSS-203ENST00000472977 NPEPPSL1A6NEC2 478 aa6.55□□□□□ -1.36
CTSS-203ENST00000472977 PPP1R11O60927 126 aaPredicted RBP6.55□□□□□ -1.36
CTSS-203ENST00000472977 GULP1Q9UBP9 304 aa6.55□□□□□ -1.36
CTSS-203ENST00000472977 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
CTSS-203ENST00000472977 ZNF451Q9Y4E5 1061 aa6.55□□□□□ -1.36
CTSS-203ENST00000472977 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
CTSS-203ENST00000472977 ITGA4P13612 1032 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 TGM1P22735 817 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 ITGA1P56199 1179 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 FAM26EQ8N5C1 309 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 SIT1Q9Y3P8 196 aa6.54□□□□□ -1.36
CTSS-203ENST00000472977 SHROOM4Q9ULL8 1493 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 AURKAO14965 403 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 RBM25P49756 843 aaKnown RBP6.53□□□□□ -1.36
CTSS-203ENST00000472977 EPHB4P54760 987 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 SPDYAQ5MJ70 313 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 MIB1Q86YT6 1006 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 TAB3Q8N5C8 712 aaPredicted RBP6.53□□□□□ -1.36
CTSS-203ENST00000472977 IGDCC4Q8TDY8 1250 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 WWC2-AS2Q96NR7 200 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 MCMBPQ9BTE3 642 aa6.53□□□□□ -1.36
CTSS-203ENST00000472977 GZF1Q9H116 711 aaPredicted RBP6.53□□□□□ -1.36
CTSS-203ENST00000472977 A0A087WZG4 1122 aa6.52□□□□□ -1.37
CTSS-203ENST00000472977 MUSKO15146 869 aa6.52□□□□□ -1.37
CTSS-203ENST00000472977 FBXO33Q7Z6M2 555 aa6.52□□□□□ -1.37
CTSS-203ENST00000472977 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
CTSS-203ENST00000472977 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
CTSS-203ENST00000472977 DIS3Q9Y2L1 958 aaKnown RBP6.52□□□□□ -1.37
CTSS-203ENST00000472977 TCAF1Q9Y4C2 921 aa6.52□□□□□ -1.37
CTSS-203ENST00000472977 PATE3B3GLJ2 98 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 STXBP3O00186 592 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 NTRK1P04629 796 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 TP53P04637 393 aaPredicted RBP6.51□□□□□ -1.37
CTSS-203ENST00000472977 ZNF28P17035 718 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
CTSS-203ENST00000472977 RBM10P98175 930 aaKnown RBP6.51□□□□□ -1.37
CTSS-203ENST00000472977 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 STK32CQ86UX6 486 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 ZC3H18Q86VM9 953 aaKnown RBP6.51□□□□□ -1.37
CTSS-203ENST00000472977 DCP2Q8IU60 420 aaKnown RBP6.51□□□□□ -1.37
CTSS-203ENST00000472977 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 NKD1Q969G9 470 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 SEMA4AQ9H3S1 761 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 FAM86C1Q9NVL1 165 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 C11orf21Q9P2W6 132 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 ZNRF3Q9ULT6 936 aa6.51□□□□□ -1.37
CTSS-203ENST00000472977 TGFB2P61812 414 aa6.5□□□□□ -1.37
CTSS-203ENST00000472977 FHL2Q14192 279 aa6.5□□□□□ -1.37
CTSS-203ENST00000472977 PPP2R5DQ14738 602 aa6.5□□□□□ -1.37
CTSS-203ENST00000472977 TMCO4Q5TGY1 634 aa6.5□□□□□ -1.37
CTSS-203ENST00000472977 TESMINQ9Y4I5 508 aa6.5□□□□□ -1.37
CTSS-203ENST00000472977 CBFA2T2O43439 604 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 ITGAEP38570 1179 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 SEPHS1P49903 392 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
CTSS-203ENST00000472977 CPNE8Q86YQ8 564 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 TM9SF2Q99805 663 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
CTSS-203ENST00000472977 CYP1A1P04798 512 aaPredicted RBP6.48□□□□□ -1.37
CTSS-203ENST00000472977 IMPDH2P12268 514 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 PPP2CBP62714 309 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 PPP2CAP67775 309 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 TCEAL1Q15170 157 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
CTSS-203ENST00000472977 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 YTHDC1Q96MU7 727 aaKnown RBP6.48□□□□□ -1.37
CTSS-203ENST00000472977 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 WHRNQ9P202 907 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 BACE2Q9Y5Z0 518 aa6.48□□□□□ -1.37
CTSS-203ENST00000472977 NPHS1O60500 1241 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 FUCA1P04066 466 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 INHBEP58166 350 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 PURAQ00577 322 aaKnown RBP6.47□□□□□ -1.37
CTSS-203ENST00000472977 SLFN13Q68D06 897 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 PLEKHO2Q8TD55 490 aa6.47□□□□□ -1.37
CTSS-203ENST00000472977 RNF34Q969K3 372 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms