RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 FCHSD1Q86WN1 690 aa12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
SMARCD3-208ENST00000472789 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 ASB14A6NK59 587 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 DTNBO60941 627 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 SCG2P13521 617 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 SYT1P21579 422 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 CCND3P30281 292 aaPredicted RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 ST3GAL1Q11201 340 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 EEPD1Q7L9B9 569 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 FGD4Q96M96 766 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 TAAR1Q96RJ0 339 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 MPHOSPH6Q99547 160 aaKnown RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
SMARCD3-208ENST00000472789 B4DLN1 442 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 OPLAHO14841 1288 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 JAK2O60674 1132 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 CYBAP13498 195 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 ADCY7P51828 1080 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 PDE4DQ08499 809 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 NTRK3Q16288 839 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 PFKFB3Q16875 520 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 ZNF467Q7Z7K2 595 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 FAM177A1Q8N128 213 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 MSL3Q8N5Y2 521 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 COL20A1Q9P218 1284 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
SMARCD3-208ENST00000472789 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 H0YGN5 161 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 hCG_1984214I3L0E3 225 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 STXBP3O00186 592 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 BRD1O95696 1058 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 SNAI1O95863 264 aaPredicted RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 ZSCAN22P10073 491 aaPredicted RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 HSD17B4P51659 736 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 UBE2SQ16763 222 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 MAMDC4Q6UXC1 1216 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 ZNF713Q8N859 430 aaPredicted RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 TRPV1Q8NER1 839 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 DNERQ8NFT8 737 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 U2AF1L4Q8WU68 220 aaKnown RBP12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 BARHL2Q9NY43 387 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 CUL9Q8IWT3 2517 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 ASTN1O14525 1302 aa12.09□□□□□ -0.47
SMARCD3-208ENST00000472789 SMCO2A6NFE2 343 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 GJB1P08034 283 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 MYCLP12524 364 aaPredicted RBP12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 PTMSP20962 102 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 PKN1Q16512 942 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 PPP1R18Q6NYC8 613 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 FBXO16Q8IX29 292 aaPredicted RBP12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 MAF1Q9H063 256 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 ABHD16BQ9H3Z7 469 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 BRMS1Q9HCU9 246 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 DDX20Q9UHI6 824 aaKnown RBP12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 UNC80Q8N2C7 3258 aa12.08□□□□□ -0.48
SMARCD3-208ENST00000472789 SPDYE3A6NKU9 549 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 SEPT4O43236 478 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 FDPSP14324 419 aaKnown RBP12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 FOSBP53539 338 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 CCDC148Q8NFR7 591 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 FBXO18Q8NFZ0 1043 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms