RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SLITRK5O94991 958 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 ZNF16P17020 682 aaPredicted RBP9.11□□□□□ -0.95
SCAF4-205ENST00000472318 CLCN7P51798 805 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 SAPCD2Q86UD0 394 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 POU5F2Q8N7G0 328 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 UBXN4Q92575 508 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 KRTAP9-9Q9BYP9 154 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 KRTAP9-4Q9BYQ2 154 aa9.11□□□□□ -0.95
SCAF4-205ENST00000472318 MYH14Q7Z406 1995 aaKnown RBP9.1□□□□□ -0.95
SCAF4-205ENST00000472318 ANKRD62A6NC57 917 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 CDK8P49336 464 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 NKG7Q16617 165 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 SLC23A3Q6PIS1 610 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 C22orf34Q6ZV56 151 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 PI4K2BQ8TCG2 481 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 ASB11Q8WXH4 323 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 PSMD1Q99460 953 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 FOXQ1Q9C009 403 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 COL5A3P25940 1745 aaPredicted RBP9.1□□□□□ -0.95
SCAF4-205ENST00000472318 INSRP06213 1382 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 SCN4AP35499 1836 aa9.1□□□□□ -0.95
SCAF4-205ENST00000472318 BRCA2P51587 3418 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 BTBD11A6QL63 1104 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 AGMOQ6ZNB7 445 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 IFNL2Q8IZJ0 200 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 SLC17A8Q8NDX2 589 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 BCL2L13Q9BXK5 485 aa9.09□□□□□ -0.95
SCAF4-205ENST00000472318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
SCAF4-205ENST00000472318 ADAMTS7Q9UKP4 1686 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 DICER1Q9UPY3 1922 aaKnown RBP9.08□□□□□ -0.96
SCAF4-205ENST00000472318 LIG3P49916 1009 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
SCAF4-205ENST00000472318 SEPT6Q14141 434 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 MFSD2AQ8NA29 543 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
SCAF4-205ENST00000472318 TERF2IPQ9NYB0 399 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 PCDHB5Q9Y5E4 795 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 TACC3Q9Y6A5 838 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 FER1L6Q2WGJ9 1857 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 RAB3GAP2Q9H2M9 1393 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
SCAF4-205ENST00000472318 SOS1Q07889 1333 aaPredicted RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 GFRA2O00451 464 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 ZNF865P0CJ78 1059 aaPredicted RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 SF3A1Q15459 793 aaKnown RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 CTU1Q7Z7A3 348 aaKnown RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 HID1Q8IV36 788 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 MIPEPQ99797 713 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 NARFQ9UHQ1 456 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 ZNF831Q5JPB2 1677 aa9.07□□□□□ -0.96
SCAF4-205ENST00000472318 RANBP2P49792 3224 aaKnown RBP9.07□□□□□ -0.96
SCAF4-205ENST00000472318 ERVV-2B6SEH9 535 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 FZD9O00144 591 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 EPS15P42566 896 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 IKZF1Q13422 519 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 MEI1Q5TIA1 1274 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 OLFM4Q6UX06 510 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 HHIPL1Q96JK4 782 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 BRIP1Q9BX63 1249 aa9.06□□□□□ -0.96
SCAF4-205ENST00000472318 AFDNP55196 1824 aaKnown RBP9.05□□□□□ -0.96
SCAF4-205ENST00000472318 TONSLQ96HA7 1378 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 PRR33A8MZF0 331 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 CST3P01034 146 aaPredicted RBP9.05□□□□□ -0.96
SCAF4-205ENST00000472318 GRK4P32298 578 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 PDE6BP35913 854 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 ST13P50502 369 aaKnown RBP9.05□□□□□ -0.96
SCAF4-205ENST00000472318 DAB2P98082 770 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 NOGQ13253 232 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 PRR5LQ6MZQ0 368 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 GPC2Q8N158 579 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 MFSD4AQ8N468 514 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 PRDM7Q9NQW5 492 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 RNF186Q9NXI6 227 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 TPX2Q9ULW0 747 aaKnown RBP9.05□□□□□ -0.96
SCAF4-205ENST00000472318 HTTP42858 3142 aa9.05□□□□□ -0.96
SCAF4-205ENST00000472318 FLT4P35916 1363 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 ZP2Q05996 745 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 SFRP5Q5T4F7 317 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 ZNF746Q6NUN9 644 aaPredicted RBP9.04□□□□□ -0.96
SCAF4-205ENST00000472318 LETMD1Q6P1Q0 360 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 DNAJC10Q8IXB1 793 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 FAM168AQ92567 244 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 MIR1-1HGQ9H1L0 117 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 SAGE1Q9NXZ1 904 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
SCAF4-205ENST00000472318 COL11A2P13942 1736 aaPredicted RBP9.03□□□□□ -0.96
SCAF4-205ENST00000472318 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
SCAF4-205ENST00000472318 FYB1O15117 783 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 SRGNP10124 158 aa9.03□□□□□ -0.96
SCAF4-205ENST00000472318 TFE3P19532 575 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms