RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 IDEP14735 1019 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBXN11-213ENST00000472155 SPAG1Q07617 926 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 CDC37Q16543 378 aaPredicted RBP16.83■□□□□ 0.28
UBXN11-213ENST00000472155 USH1GQ495M9 461 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 ARHGAP29Q52LW3 1261 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 CNGA4Q8IV77 575 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.28
UBXN11-213ENST00000472155 CUL5Q93034 780 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 CNOT6LQ96LI5 555 aaKnown RBP16.83■□□□□ 0.28
UBXN11-213ENST00000472155 TUBGCP2Q9BSJ2 902 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 REXO2Q9Y3B8 237 aaKnown RBP16.83■□□□□ 0.28
UBXN11-213ENST00000472155 PCDHA1Q9Y5I3 950 aa16.83■□□□□ 0.28
UBXN11-213ENST00000472155 C21orf2O43822 256 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 RAD51AP2Q09MP3 1159 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
UBXN11-213ENST00000472155 SLC30A10Q6XR72 485 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 SV2BQ7L1I2 683 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 CDAN1Q8IWY9 1227 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 EHD4Q9H223 541 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
UBXN11-213ENST00000472155 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 A0A1W2PRG0 241 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 CCNE1P24864 410 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 MIIPQ5JXC2 388 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 WDR59Q6PJI9 974 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
UBXN11-213ENST00000472155 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
UBXN11-213ENST00000472155 hCG_1984214I3L0E3 225 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 TADA3O75528 432 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 ICA1Q05084 483 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 ZNF713Q8N859 430 aaPredicted RBP16.81■□□□□ 0.28
UBXN11-213ENST00000472155 DDX12PQ92771 950 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 CUEDC2Q9H467 287 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 THAP9Q9H5L6 903 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 TBC1D7Q9P0N9 293 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
UBXN11-213ENST00000472155 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 E9PMD0 336 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 F5H6K3 240 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 GH2P01242 217 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 FECHP22830 423 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 KLRC3Q07444 240 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 STIM1Q13586 685 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
UBXN11-213ENST00000472155 KIAA1755Q5JYT7 1200 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 ZNF397Q8NF99 534 aaPredicted RBP16.81■□□□□ 0.28
UBXN11-213ENST00000472155 RAD54LQ92698 747 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 DHTKD1Q96HY7 919 aaPredicted RBP16.81■□□□□ 0.28
UBXN11-213ENST00000472155 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 MRFAP1Q9Y605 127 aa16.81■□□□□ 0.28
UBXN11-213ENST00000472155 MEIS2O14770 477 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 MYL1P05976 194 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 ARHGAP25P42331 645 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 ZNF569Q5MCW4 686 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 TATDN1Q6P1N9 297 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 NDUFB10O96000 172 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 SSBP05455 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBXN11-213ENST00000472155 EEF1GP26641 437 aaKnown RBP16.8■□□□□ 0.28
UBXN11-213ENST00000472155 ECE1P42892 770 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 EN1Q05925 392 aaPredicted RBP16.8■□□□□ 0.28
UBXN11-213ENST00000472155 PPP4R3AQ6IN85 833 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
UBXN11-213ENST00000472155 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 EPHB6O15197 1021 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 HOXA13P31271 388 aaPredicted RBP16.79■□□□□ 0.28
UBXN11-213ENST00000472155 MRPL12P52815 198 aaKnown RBP16.79■□□□□ 0.28
UBXN11-213ENST00000472155 TMEM266Q2M3C6 531 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 CCDC155Q8N6L0 562 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 MNS1Q8NEH6 495 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 NAA15Q9BXJ9 866 aaKnown RBP16.79■□□□□ 0.28
UBXN11-213ENST00000472155 KANSL2Q9H9L4 492 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 POTEB3A0JP26 581 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 POTECB2RU33 542 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 ABCB5Q2M3G0 1257 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 TMEM119Q4V9L6 283 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 POTEBQ6S5H4 581 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 SLC35F6Q8N357 371 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 CYP2W1Q8TAV3 490 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 MKL1Q969V6 931 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
UBXN11-213ENST00000472155 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
UBXN11-213ENST00000472155 MARCH6O60337 910 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 RAD17O75943 681 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 MTIF2P46199 727 aaKnown RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 CLCN6P51797 869 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 TBC1D8BQ0IIM8 1120 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
UBXN11-213ENST00000472155 STYK1Q6J9G0 422 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 DNAJC19Q96DA6 116 aa16.78■□□□□ 0.28
UBXN11-213ENST00000472155 ZFP91Q96JP5 570 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms