RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	PLCL1	Q15111	1095 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	HSF5	Q4G112	596 aa	Predicted RBP	5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	GALNT18	Q6P9A2	607 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	CEP128	Q6ZU80	1094 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	KRT26	Q7Z3Y9	468 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	LRRTM3	Q86VH5	581 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	JAML	Q86YT9	394 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	DHX37	Q8IY37	1157 aa	Known RBP	5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	LILRA2	Q8N149	483 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	DPF3	Q92784	378 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	CDIP1	Q9H305	208 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	IFT57	Q9NWB7	429 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	ACSL6	Q9UKU0	697 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	PCDHA9	Q9Y5H5	950 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	PCDHA2	Q9Y5H9	948 aa		5.51	□□□□□ -1.53
PTCD3-209	ENST00000472044	FAM83G	A6ND36	823 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044		B4E1Z4	1266 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044		H7BY64	318 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	IRS4	O14654	1257 aa	Predicted RBP	5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	PPP1R11	O60927	126 aa	Predicted RBP	5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	USP2	O75604	605 aa	Predicted RBP	5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	NPTXR	O95502	500 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	APP	P05067	770 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	KCNA6	P17658	529 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	IGFALS	P35858	605 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	HK2	P52789	917 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	GUCY1A3	Q02108	690 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	SNX17	Q15036	470 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	ZNF792	Q3KQV3	632 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	ARTN	Q5T4W7	220 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	XP32	Q5T750	250 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	FILIP1	Q7Z7B0	1213 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	MTDH	Q86UE4	582 aa	Known RBP	5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	THNSL2	Q86YJ6	484 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	DDX1	Q92499	740 aa	Known RBP	5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	MTA3	Q9BTC8	594 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	MAPRE3	Q9UPY8	281 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	PCDHA8	Q9Y5H6	950 aa		5.5	□□□□□ -1.53
PTCD3-209	ENST00000472044	GSG1L2	A8MUP6	293 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	RASGRP1	O95267	797 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	MYCLP1	P12525	358 aa	Predicted RBP	5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	STAT3	P40763	770 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	BCL6	P41182	706 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	PAK1	Q13153	545 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	SLC14A2	Q15849	920 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	ANKLE2	Q86XL3	938 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	PPM1K	Q8N3J5	372 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	PCDH19	Q8TAB3	1148 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	PLEKHO2	Q8TD55	490 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	ORAI3	Q9BRQ5	295 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	ALG1	Q9BT22	464 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	FBXL7	Q9UJT9	491 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	CTNND2	Q9UQB3	1225 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	TNPO3	Q9Y5L0	923 aa	Known RBP	5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044		X6R8D5	127 aa		5.49	□□□□□ -1.53
PTCD3-209	ENST00000472044	FAM47E-STBD1	D6RA91	191 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	OPA1	O60313	960 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	PDE8A	O60658	829 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	SOD2	P04179	222 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	FLT3	P36888	993 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	ERVFC1	P60507	584 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	MVK	Q03426	396 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	PTPRO	Q16827	1216 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	CEP68	Q76N32	757 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	RNF180	Q86T96	592 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	NLRX1	Q86UT6	975 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	NLRP10	Q86W26	655 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	RIOX2	Q8IUF8	465 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	AHI1	Q8N157	1196 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	FLAD1	Q8NFF5	587 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	ZCRB1	Q8TBF4	217 aa	Known RBP	5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	SHISA4	Q96DD7	197 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	TMEM169	Q96HH4	297 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	PLCD4	Q9BRC7	762 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	TARS2	Q9BW92	718 aa	Known RBP	5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	CAAP1	Q9H8G2	361 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	PDLIM7	Q9NR12	457 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	IMPACT	Q9P2X3	320 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	GULP1	Q9UBP9	304 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	TAF6L	Q9Y6J9	622 aa		5.48	□□□□□ -1.53
PTCD3-209	ENST00000472044	GSTA4	O15217	222 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	PSPN	O60542	156 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	EFEMP2	O95967	443 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	CKM	P06732	381 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	RAC2	P15153	192 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	GRK2	P25098	689 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	GRK3	P35626	688 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	GP2	P55259	537 aa	Known RBP	5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	ZNF460	Q14592	562 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	MROH9	Q5TGP6	573 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	CBLL1	Q75N03	491 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	C16orf59	Q7L2K0	433 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	LZTR1	Q8N653	840 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	CHAC2	Q8WUX2	184 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	MYLIP	Q8WY64	445 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	GPATCH3	Q96I76	525 aa		5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	CELF4	Q9BZC1	486 aa	Known RBP	5.47	□□□□□ -1.53
PTCD3-209	ENST00000472044	IPPK	Q9H8X2	491 aa		5.47	□□□□□ -1.53

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