RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 MOXD2PA6NHM9 499 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 GCOM1H8Y6P7 765 aaPredicted RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 CTAGE5O15320 804 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 ASGR1P07306 291 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 POLR2MP0CAP2 368 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 SYN1P17600 705 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 EIF2AK2P19525 551 aaKnown RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 RTP1P59025 263 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 APOBRQ0VD83 1088 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 STXBP2Q15833 593 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 RTN1Q16799 776 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 DUSP28Q4G0W2 176 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 GNASQ5JWF2 1037 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 PCSK9Q8NBP7 692 aaKnown RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 BRF1Q92994 677 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
SYN3-211ENST00000472027 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 ZMYND8Q9ULU4 1186 aaPredicted RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 NAP1L2Q9ULW6 460 aaPredicted RBP10.58□□□□□ -0.72
SYN3-211ENST00000472027 LCTP09848 1927 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 GOLGA8AA7E2F4 631 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 GOLGA8BA8MQT2 603 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 NR3C2P08235 984 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 CDC27P30260 824 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
SYN3-211ENST00000472027 BEX3Q00994 111 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 SNX17Q15036 470 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 SEPT14Q6ZU15 432 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 SCFD2Q8WU76 684 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 STARD7Q9NQZ5 370 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 COLQQ9Y215 455 aaPredicted RBP10.57□□□□□ -0.72
SYN3-211ENST00000472027 ATP11BQ9Y2G3 1177 aa10.57□□□□□ -0.72
SYN3-211ENST00000472027 NKRFO15226 690 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYN3-211ENST00000472027 ZEB2O60315 1214 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 EIF3JO75822 258 aaKnown RBP10.56□□□□□ -0.72
SYN3-211ENST00000472027 TXNP10599 105 aaKnown RBP10.56□□□□□ -0.72
SYN3-211ENST00000472027 MYCLP12524 364 aaPredicted RBP10.56□□□□□ -0.72
SYN3-211ENST00000472027 METAP2P50579 478 aaKnown RBP eCLIP10.56□□□□□ -0.72
SYN3-211ENST00000472027 RCAN1P53805 252 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 FUT2Q10981 343 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 PGM5Q15124 567 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 PPP2R5BQ15173 497 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 FSCN1Q16658 493 aaKnown RBP10.56□□□□□ -0.72
SYN3-211ENST00000472027 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 OR6J1Q8NGC5 347 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 COPS5Q92905 334 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
SYN3-211ENST00000472027 ELP1O95163 1332 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 MCM3APO60318 1980 aa10.56□□□□□ -0.72
SYN3-211ENST00000472027 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 MEIS2O14770 477 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 ARIH2O95376 493 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 EVCP57679 992 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 TLE2Q04725 743 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
SYN3-211ENST00000472027 LY6KQ17RY6 165 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 CCDC62Q6P9F0 684 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 USP17L6PQ6QN14 398 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 CXCL17Q6UXB2 119 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 HEATR3Q7Z4Q2 680 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 VSIG10LQ86VR7 867 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 CUL5Q93034 780 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
SYN3-211ENST00000472027 UPF3BQ9BZI7 483 aaKnown RBP10.55□□□□□ -0.72
SYN3-211ENST00000472027 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
SYN3-211ENST00000472027 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
SYN3-211ENST00000472027 CABYRO75952 493 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 SEC24BO95487 1268 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
SYN3-211ENST00000472027 CCND2P30279 289 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 CPT1AP50416 773 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 CDK7P50613 346 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 CCT2P78371 535 aaKnown RBP10.54□□□□□ -0.72
SYN3-211ENST00000472027 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 IL31RAQ8NI17 732 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 GPKOWQ92917 476 aaPredicted RBP eCLIP10.54□□□□□ -0.72
SYN3-211ENST00000472027 LARP6Q9BRS8 491 aaKnown RBP10.54□□□□□ -0.72
SYN3-211ENST00000472027 PRO3102Q9H379 93 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 RBM27Q9P2N5 1060 aaKnown RBP10.54□□□□□ -0.72
SYN3-211ENST00000472027 PRKAG2Q9UGJ0 569 aa10.54□□□□□ -0.72
SYN3-211ENST00000472027 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms