RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 RFX6Q8HWS3 928 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 ATP2A3Q93084 1043 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 WDR11Q9BZH6 1224 aa9.38□□□□□ -0.91
CD47-204ENST00000471694 CTSHP09668 335 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ATP6V1E1P36543 226 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PHKA2P46019 1235 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ST8SIA6P61647 398 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CDR2Q01850 454 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CCNYQ8ND76 341 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 NUDT12Q9BQG2 462 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 GGA3Q9NZ52 723 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 COL15A1P39059 1388 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ERVV-1B6SEH8 477 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 POLR3GO15318 223 aaPredicted RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 PDE8BO95263 885 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 TBC1D8O95759 1140 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CYBBP04839 570 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 HOXA13P31271 388 aaPredicted RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 ABCD1P33897 745 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 KAZNQ674X7 775 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 TMEM179Q6ZVK1 233 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PDCD6IPQ8WUM4 868 aaKnown RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 ACCSQ96QU6 501 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 BIVM-ERCC5R4GMW8 1640 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PRAG1Q86YV5 1406 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 H7C0C1 242 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PRRG1O14668 218 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 MED7O43513 233 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 TADA2AO75478 443 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CAVIN2O95810 425 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ATP5OP48047 213 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 BACH2Q9BYV9 841 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 RAB23Q9ULC3 237 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 TNKSO95271 1327 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 SEPT6Q14141 434 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 NELFBQ8WX92 580 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 GCOM2Q9BZD3 368 aaPredicted RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 KCNH3Q9ULD8 1083 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ANKARQ7Z5J8 1434 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
CD47-204ENST00000471694 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 KLHL30Q0D2K2 578 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 SFMBT2Q5VUG0 894 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 MYOCDQ8IZQ8 938 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 PGBD1Q96JS3 809 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 SPATA31A3Q5VYP0 1347 aa9.37□□□□□ -0.91
CD47-204ENST00000471694 ZMYND10O75800 440 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 ARL13BQ3SXY8 428 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 NXNQ6DKJ4 435 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 FAM167AQ96KS9 214 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 TOPORSQ9NS56 1045 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 CLCA2Q9UQC9 943 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 MYO5CQ9NQX4 1742 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 DPEP1P16444 411 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 U2AF1L4Q8WU68 220 aaKnown RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 CHMLP26374 656 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 PPARGP37231 505 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 MYL7Q01449 175 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 RAB44Q7Z6P3 723 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 TAB3Q8N5C8 712 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 LZTFL1Q9NQ48 299 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 HACD3Q9P035 362 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 CPA1P15085 419 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 ADORA1P30542 326 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 RBBP5Q15291 538 aaKnown RBP9.36□□□□□ -0.91
CD47-204ENST00000471694 VPS72Q15906 364 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 FBXO41Q8TF61 875 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 IFT122Q9HBG6 1241 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 KIAA1024Q9UPX6 916 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 SCG2P13521 617 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 TNFAIP2Q03169 654 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 THNSL1Q8IYQ7 743 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 CDC26Q8NHZ8 85 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 KRT12Q99456 494 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 VPS37BQ9H9H4 285 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
CD47-204ENST00000471694 CUTAO60888 179 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 PRKCQQ04759 706 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 FYB2Q5VWT5 728 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 GALNT17Q6IS24 598 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 ARHGEF25Q86VW2 580 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 CCDC105Q8IYK2 499 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 SNX19Q92543 992 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
CD47-204ENST00000471694 E7EWF7 191 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms