RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 NOP56O00567 594 aaKnown RBP5.19□□□□□ -1.58
COPS3-206ENST00000471414 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
COPS3-206ENST00000471414 ARID5AQ03989 594 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 SLC9A5Q14940 896 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 FXNQ16595 210 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 INF2Q27J81 1249 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 ACBD5Q5T8D3 534 aaPredicted RBP5.19□□□□□ -1.58
COPS3-206ENST00000471414 E4F1Q66K89 784 aaPredicted RBP5.19□□□□□ -1.58
COPS3-206ENST00000471414 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 BTN2A2Q8WVV5 523 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 C1orf159Q96HA4 380 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 PWWP2AQ96N64 755 aa5.19□□□□□ -1.58
COPS3-206ENST00000471414 A0A1W2PQJ5 194 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 KLF4O43474 513 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 NPHS1O60500 1241 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 GJB6O95452 261 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 NCAM1P13591 858 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 PFKLP17858 780 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 PMLP29590 882 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 HOXC12P31275 282 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 LIMS1P48059 325 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 LARP1BQ659C4 914 aaKnown RBP5.18□□□□□ -1.58
COPS3-206ENST00000471414 B3GNT8Q7Z7M8 397 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 PEX11GQ96HA9 241 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 EPN3Q9H201 632 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 RXFP1Q9HBX9 757 aa5.18□□□□□ -1.58
COPS3-206ENST00000471414 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
COPS3-206ENST00000471414 TMEFF2Q9UIK5 374 aaPredicted RBP5.18□□□□□ -1.58
COPS3-206ENST00000471414 SH3D21A4FU49 640 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 ZBTB7AO95365 584 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 BMP7P18075 431 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 MC3RP41968 323 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 GFRA1P56159 465 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 FOXO4P98177 505 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 SLC10A6Q3KNW5 377 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 IQCEQ6IPM2 695 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 CABP7Q86V35 215 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 NLRP10Q86W26 655 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 RIOX2Q8IUF8 465 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 CELF2-AS1Q8N7Q2 184 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 FNIP1Q8TF40 1166 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 RTEL1Q9NZ71 1219 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 NUDT5Q9UKK9 219 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 NPFFR2Q9Y5X5 522 aa5.17□□□□□ -1.58
COPS3-206ENST00000471414 NTRK1P04629 796 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 SLC6A11P48066 632 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 SF1Q15637 639 aaKnown RBP5.16□□□□□ -1.58
COPS3-206ENST00000471414 SLC35F1Q5T1Q4 408 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 EEPD1Q7L9B9 569 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 MIB1Q86YT6 1006 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 ALG3Q92685 438 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 CCDC140Q96MF4 163 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 X6R8D5 127 aa5.16□□□□□ -1.58
COPS3-206ENST00000471414 DDAH1O94760 285 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 CPP00450 1065 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 FUCA1P04066 466 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 CTSWP56202 376 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 CACNB2Q08289 660 aaPredicted RBP5.15□□□□□ -1.59
COPS3-206ENST00000471414 KCNAB2Q13303 367 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 DDR2Q16832 855 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 VMACQ2NL98 169 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 SV2CQ496J9 727 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 SP8Q8IXZ3 490 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 LINC00482Q8N8I6 264 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 TMEM145Q8NBT3 493 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 HNRNPLLQ8WVV9 542 aaKnown RBP5.15□□□□□ -1.59
COPS3-206ENST00000471414 CDIP1Q9H305 208 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 ZCCHC4Q9H5U6 513 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 BCAS3Q9H6U6 928 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 FBXL7Q9UJT9 491 aa5.15□□□□□ -1.59
COPS3-206ENST00000471414 A0A1W2PQU0 124 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 OTOL1A6NHN0 477 aaPredicted RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 C22orf46C9J442 243 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 SGSM2O43147 1006 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 SNRPB2P08579 225 aaKnown RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 GRIA2P42262 883 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 PRSS53Q2L4Q9 553 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 LIPIQ6XZB0 460 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 DCP2Q8IU60 420 aaKnown RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 TEX2Q8IWB9 1127 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 NLGN1Q8N2Q7 840 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 RCBTB1Q8NDN9 531 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 MARCH2Q9P0N8 246 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 DBR1Q9UK59 544 aaKnown RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 SIT1Q9Y3P8 196 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 TIMM13Q9Y5L4 95 aaPredicted RBP5.14□□□□□ -1.59
COPS3-206ENST00000471414 NCANO14594 1321 aa5.14□□□□□ -1.59
COPS3-206ENST00000471414 C8BP07358 591 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 RBM25P49756 843 aaKnown RBP5.13□□□□□ -1.59
COPS3-206ENST00000471414 SLURP1P55000 103 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 RPL11P62913 178 aaKnown RBP5.13□□□□□ -1.59
COPS3-206ENST00000471414 PPP2R2AP63151 447 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 MAP4K2Q12851 820 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 MROH9Q5TGP6 573 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 ANKS3Q6ZW76 656 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 SYT8Q8NBV8 401 aa5.13□□□□□ -1.59
COPS3-206ENST00000471414 SMARCC2Q8TAQ2 1214 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms