RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 SYNE3Q6ZMZ3 975 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 MICU3Q86XE3 530 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 MCF2L2Q86YR7 1114 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 RAB11FIP4Q86YS3 637 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 CCDC144CPQ8IYA2 1237 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 RGS22Q8NE09 1264 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 MORC4Q8TE76 937 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 PAWRQ96IZ0 340 aaKnown RBP8.89□□□□□ -0.99
TRIM59-204ENST00000471396 PIGSQ96S52 555 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 SPZ1Q9BXG8 430 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 KATNBL1Q9H079 304 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 C11orf49Q9H6J7 331 aa8.89□□□□□ -0.99
TRIM59-204ENST00000471396 MRPL11Q9Y3B7 192 aaKnown RBP8.89□□□□□ -0.99
TRIM59-204ENST00000471396 ALPK3Q96L96 1907 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 PNMA6FA0A0J9YX94 578 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 DNM1LO00429 736 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 TNRC18O15417 2968 aaPredicted RBP8.88□□□□□ -0.99
TRIM59-204ENST00000471396 ST18O60284 1047 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 EVI5O60447 810 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 PLEKHA8P1O95397 391 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 COL6A1P12109 1028 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 RPS6KB1P23443 525 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 PSMA5P28066 241 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 RCAN1P53805 252 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 FGD1P98174 961 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 GHRHRQ02643 423 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 ACVR2BQ13705 512 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 ANO1Q5XXA6 986 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 TMTC3Q6ZXV5 915 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 ARRDC4Q8NCT1 418 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 DNERQ8NFT8 737 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 PURBQ96QR8 312 aaKnown RBP8.88□□□□□ -0.99
TRIM59-204ENST00000471396 USP26Q9BXU7 913 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 XPNPEP3Q9NQH7 507 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 FAM184BQ9ULE4 1060 aa8.88□□□□□ -0.99
TRIM59-204ENST00000471396 KLF18A0A0U1RQI7 1052 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 OPLAHO14841 1288 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 ZBTB43O43298 467 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 EIF5BO60841 1220 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 DUSP11O75319 330 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 CPA1P15085 419 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 CASTP20810 708 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 EDNRBP24530 442 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 LRRC41Q15345 812 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 RTN1Q16799 776 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 CCDC144BQ3MJ40 725 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 FBXO16Q8IX29 292 aaPredicted RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 SRBD1Q8N5C6 995 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 FANCBQ8NB91 859 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 PIBF1Q8WXW3 757 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 LENG1Q96BZ8 264 aaPredicted RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 RRP36Q96EU6 259 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 MPHOSPH6Q99547 160 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 RBM28Q9NW13 759 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 SEC63Q9UGP8 760 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 BRPF3Q9ULD4 1205 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 PCDHA1Q9Y5I3 950 aa8.87□□□□□ -0.99
TRIM59-204ENST00000471396 DDX49Q9Y6V7 483 aaKnown RBP8.87□□□□□ -0.99
TRIM59-204ENST00000471396 NID2Q14112 1375 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 CNTNAP5Q8WYK1 1306 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 SYNRGQ9UMZ2 1314 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 GOLGA8AA7E2F4 631 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 GOLGA8BA8MQT2 603 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 ADAMTS4O75173 837 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 PGK1P00558 417 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 CFBP00751 764 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
TRIM59-204ENST00000471396 ADCYAP1R1P41586 468 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 HSD17B4P51659 736 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 PDE4DQ08499 809 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 GJC2Q5T442 439 aaPredicted RBP8.86□□□□□ -0.99
TRIM59-204ENST00000471396 Q6ZUG5 572 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 EEPD1Q7L9B9 569 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 RNF180Q86T96 592 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 FBXL16Q8N461 479 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 DPF3Q92784 378 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 BRF1Q92994 677 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 RMDN3Q96TC7 470 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 AGXT2Q9BYV1 514 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 TM6SF1Q9BZW5 370 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 ZSWIM6Q9HCJ5 1215 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 MAP3K20Q9NYL2 800 aaKnown RBP8.86□□□□□ -0.99
TRIM59-204ENST00000471396 COL20A1Q9P218 1284 aa8.86□□□□□ -0.99
TRIM59-204ENST00000471396 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
TRIM59-204ENST00000471396 B4DLN1 442 aa8.85□□□□□ -0.99
TRIM59-204ENST00000471396 GCOM1H8Y6P7 765 aaPredicted RBP8.85□□□□□ -0.99
TRIM59-204ENST00000471396 ADCY6O43306 1168 aa8.85□□□□□ -0.99
TRIM59-204ENST00000471396 POLR2MP0CAP2 368 aa8.85□□□□□ -0.99
TRIM59-204ENST00000471396 CST5P28325 142 aaPredicted RBP8.85□□□□□ -0.99
TRIM59-204ENST00000471396 METAP2P50579 478 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIM59-204ENST00000471396 MRPL12P52815 198 aaKnown RBP8.85□□□□□ -0.99
TRIM59-204ENST00000471396 TNFAIP2Q03169 654 aa8.85□□□□□ -0.99
TRIM59-204ENST00000471396 APOBRQ0VD83 1088 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms