RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 VTA1Q9NP79 307 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 PXMP2Q9NR77 195 aa22.76■■□□□ 1.23
HDAC7-220ENST00000471235 RBM27Q9P2N5 1060 aaKnown RBP22.76■■□□□ 1.23
HDAC7-220ENST00000471235 ADCY6O43306 1168 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 EIF2AK2P19525 551 aaKnown RBP22.75■■□□□ 1.23
HDAC7-220ENST00000471235 NAPAP54920 295 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 PDE4DQ08499 809 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 PKN1Q16512 942 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 EEPD1Q7L9B9 569 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 MPHOSPH6Q99547 160 aaKnown RBP22.75■■□□□ 1.23
HDAC7-220ENST00000471235 BARHL2Q9NY43 387 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 FRMPD4Q14CM0 1322 aa22.75■■□□□ 1.23
HDAC7-220ENST00000471235 PIK3CDO00329 1044 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 MEIS2O14770 477 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 CPLX1O14810 134 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 FARP2O94887 1054 aaPredicted RBP22.74■■□□□ 1.23
HDAC7-220ENST00000471235 CAPN2P17655 700 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 ME3Q16798 604 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 CCDC144BQ3MJ40 725 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 ARHGEF16Q5VV41 709 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 FCHSD1Q86WN1 690 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 CUL5Q93034 780 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 FAM184BQ9ULE4 1060 aa22.74■■□□□ 1.23
HDAC7-220ENST00000471235 B4DLN1 442 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 MNX1P50219 401 aaPredicted RBP22.73■■□□□ 1.23
HDAC7-220ENST00000471235 MRPL12P52815 198 aaKnown RBP22.73■■□□□ 1.23
HDAC7-220ENST00000471235 AKAP17AQ02040 695 aaKnown RBP22.73■■□□□ 1.23
HDAC7-220ENST00000471235 RABEP1Q15276 862 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 UBE2SQ16763 222 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 TAPT1Q6NXT6 567 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 CPLX2Q6PUV4 134 aaKnown RBP22.73■■□□□ 1.23
HDAC7-220ENST00000471235 USP17L6PQ6QN14 398 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 ANKLE1Q8NAG6 615 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 SMARCC2Q8TAQ2 1214 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 GTF3C6Q969F1 213 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 PDCD2LQ9BRP1 358 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 PSTPIP2Q9H939 334 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 PDGFCQ9NRA1 345 aa22.73■■□□□ 1.23
HDAC7-220ENST00000471235 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.72■■□□□ 1.23
HDAC7-220ENST00000471235 RARBP10826 455 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 ADCYAP1R1P41586 468 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 UBE2Q1Q7Z7E8 422 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 TRIM22Q8IYM9 498 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 NECAB1Q8N987 351 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 IL31RAQ8NI17 732 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 DIS3LQ8TF46 1054 aaKnown RBP22.72■■□□□ 1.23
HDAC7-220ENST00000471235 IWS1Q96ST2 819 aa22.72■■□□□ 1.23
HDAC7-220ENST00000471235 ADCY7P51828 1080 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 SSRP1Q08945 709 aaKnown RBP22.71■■□□□ 1.23
HDAC7-220ENST00000471235 ST3GAL1Q11201 340 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 PGM5Q15124 567 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 RIC8AQ9NPQ8 531 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 XPNPEP3Q9NQH7 507 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 SYNRGQ9UMZ2 1314 aa22.71■■□□□ 1.23
HDAC7-220ENST00000471235 CDKL5O76039 1030 aa22.7■■□□□ 1.22
HDAC7-220ENST00000471235 CTDNEP1O95476 244 aa22.7■■□□□ 1.22
HDAC7-220ENST00000471235 NR3C2P08235 984 aa22.7■■□□□ 1.22
HDAC7-220ENST00000471235 LIMCH1Q9UPQ0 1083 aa22.7■■□□□ 1.22
HDAC7-220ENST00000471235 STK36Q9NRP7 1315 aa22.7■■□□□ 1.22
HDAC7-220ENST00000471235 RBM47A0AV96 593 aaKnown RBP22.69■■□□□ 1.22
HDAC7-220ENST00000471235 ESYT2A0FGR8 921 aa22.69■■□□□ 1.22
HDAC7-220ENST00000471235 DUSP11O75319 330 aaKnown RBP22.69■■□□□ 1.22
HDAC7-220ENST00000471235 DEXIO95424 95 aa22.69■■□□□ 1.22
HDAC7-220ENST00000471235 PGK1P00558 417 aa22.69■■□□□ 1.22
HDAC7-220ENST00000471235 TNFAIP2Q03169 654 aa22.69■■□□□ 1.22
HDAC7-220ENST00000471235 STXBP2Q15833 593 aa22.69■■□□□ 1.22
HDAC7-220ENST00000471235 MKI67P46013 3256 aaKnown RBP22.69■■□□□ 1.22
HDAC7-220ENST00000471235 TNRC18O15417 2968 aaPredicted RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 SMCO2A6NFE2 343 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 DTNBO60941 627 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 ADAMTS4O75173 837 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 MYCLP12524 364 aaPredicted RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 SMPD1P17405 629 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 PTGS1P23219 599 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 LRRC41Q15345 812 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 TMEM63BQ5T3F8 832 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 GJC2Q5T442 439 aaPredicted RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 IQSEC1Q6DN90 963 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 UPF3AQ9H1J1 476 aaKnown RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 VPS54Q9P1Q0 977 aa22.68■■□□□ 1.22
HDAC7-220ENST00000471235 GNEQ9Y223 722 aaKnown RBP22.68■■□□□ 1.22
HDAC7-220ENST00000471235 DNM1LO00429 736 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 CCND2P30279 289 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 TEX2Q8IWB9 1127 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 CCDC148Q8NFR7 591 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 SCFD2Q8WU76 684 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 PAWRQ96IZ0 340 aaKnown RBP22.67■■□□□ 1.22
HDAC7-220ENST00000471235 AIFM3Q96NN9 605 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 WDR11Q9BZH6 1224 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 ZMYND12Q9H0C1 365 aa22.67■■□□□ 1.22
HDAC7-220ENST00000471235 MYADML2A6NDP7 307 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 ADAMTS3O15072 1205 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 EIF3JO75822 258 aaKnown RBP22.66■■□□□ 1.22
HDAC7-220ENST00000471235 CLK2P49760 499 aaKnown RBP22.66■■□□□ 1.22
HDAC7-220ENST00000471235 TLK2Q86UE8 772 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 VSIG10LQ86VR7 867 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 ARRDC4Q8NCT1 418 aa22.66■■□□□ 1.22
HDAC7-220ENST00000471235 NSUN7Q8NE18 718 aaKnown RBP22.66■■□□□ 1.22
HDAC7-220ENST00000471235 GLT8D2Q9H1C3 349 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms