RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 FAM163BP0C2L3 166 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TRIM21P19474 475 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 RXRAP19793 462 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ALDH5A1P51649 535 aaPredicted RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 EIF4A2Q14240 407 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 KRT71Q3SY84 523 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MCMDC2Q4G0Z9 681 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 RESP18Q5W5W9 173 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 GGT6Q6P531 493 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MTHFD1LQ6UB35 978 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 SEPT14Q6ZU15 432 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 TAX1BP1Q86VP1 789 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 IQCKQ8N0W5 287 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MMGT1Q8N4V1 131 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 CNBD1Q8NA66 436 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 KLHDC4Q8TBB5 520 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MIPOL1Q8TD10 442 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 FBF1Q8TES7 1133 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD24Q8TF21 1146 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 ELAC2Q9BQ52 826 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 ARHGEF10LQ9HCE6 1279 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 DNAAF2Q9NVR5 837 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 RHBDL2Q9NX52 303 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 MAPK8IP1Q9UQF2 711 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 THRAP3Q9Y2W1 955 aaKnown RBP4.66□□□□□ -1.66
VPS50-210ENST00000471188 CD2APQ9Y5K6 639 aa4.66□□□□□ -1.66
VPS50-210ENST00000471188 USP42Q9H9J4 1324 aaKnown RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 TTC26A0AVF1 554 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 CFAP73A6NFT4 308 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 PPIP5K2O43314 1243 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 PPP6R2O75170 966 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 ERCC5P28715 1186 aaPredicted RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 ALDH3A1P30838 453 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MAGEA10P43363 369 aaPredicted RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 MAGOHP61326 146 aaKnown RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 HERVK_113P62684 666 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 PPP2R2AP63151 447 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 KRT31Q15323 416 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 CCDC38Q502W7 563 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 LACTB2Q53H82 288 aaPredicted RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 RNF220Q5VTB9 566 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 HAUS3Q68CZ6 603 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 RUFY4Q6ZNE9 571 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 FNBP4Q8N3X1 1017 aaPredicted RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD13CQ8N6S4 541 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MDM1Q8TC05 714 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MAIP1Q8WWC4 291 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 CAVIN3Q969G5 261 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MAGOHBQ96A72 148 aaKnown RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 ZNF274Q96GC6 653 aaPredicted RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 FGD4Q96M96 766 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MED15Q96RN5 788 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 YIPF2Q9BWQ6 316 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 UBE2OQ9C0C9 1292 aaKnown RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 PHACTR1Q9C0D0 580 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 CCDC113Q9H0I3 377 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 VCXQ9H320 206 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 RBM12Q9NTZ6 932 aaKnown RBP4.65□□□□□ -1.66
VPS50-210ENST00000471188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.65□□□□□ -1.66
VPS50-210ENST00000471188 SNX12Q9UMY4 172 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MYH10P35580 1976 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 A2ML1A8K2U0 1454 aa4.65□□□□□ -1.66
VPS50-210ENST00000471188 MED23Q9ULK4 1368 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 A0A0G2JLW4 131 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 TLDC2A0PJX2 215 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 A6NHS1 94 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 SMIM23A6NLE4 172 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 E7EWF7 191 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 IGF2BP3O00425 579 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS50-210ENST00000471188 LIN7AO14910 233 aaPredicted RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 NCK2O43639 380 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 GLI1P08151 1106 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 GHRP10912 638 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 NQO1P15559 274 aaKnown RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 RFC5P40937 340 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 COPB1P53618 953 aaKnown RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 ZBED6P86452 979 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 MDM2Q00987 491 aaPredicted RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 MORC3Q14149 939 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 PDIA5Q14554 519 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 TTF1Q15361 905 aaPredicted RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 TJAP1Q5JTD0 557 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 AKNAD1Q5T1N1 836 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 LMOD2Q6P5Q4 547 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 CREG2Q8IUH2 290 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 FAM114A1Q8IWE2 563 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 KLHL7Q8IXQ5 586 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 RBM12BQ8IXT5 1001 aaKnown RBP4.65□□□□□ -1.67
VPS50-210ENST00000471188 CHMP6Q96FZ7 201 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 MS4A14Q96JA4 679 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 RPS6KC1Q96S38 1066 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 PHOX2BQ99453 314 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 KRT12Q99456 494 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 UBAC1Q9BSL1 405 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 GALNT8Q9NY28 637 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 LRWD1Q9UFC0 647 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 SWAP70Q9UH65 585 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 TBC1D2BQ9UPU7 963 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 USH1CQ9Y6N9 552 aa4.65□□□□□ -1.67
VPS50-210ENST00000471188 ATP7BP35670 1465 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms