RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 TMOD4Q9NZQ9 345 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 DDX25Q9UHL0 483 aaKnown RBP9.44□□□□□ -0.9
GTF3A-206ENST00000470606 SERTAD1Q9UHV2 236 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
GTF3A-206ENST00000470606 POTEMA6NI47 508 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
GTF3A-206ENST00000470606 POLR2MP0CAP2 368 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 CASP1P29466 404 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 HOXA7P31268 230 aaPredicted RBP9.44□□□□□ -0.9
GTF3A-206ENST00000470606 CIITAP33076 1130 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TECP42680 631 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TXKP42681 527 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 USP11P51784 963 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 PNOCQ13519 176 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 CALCRLQ16602 461 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 GPAT2Q6NUI2 795 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 DTHD1Q6ZMT9 781 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 ARMC9Q7Z3E5 817 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 ETNPPLQ8TBG4 499 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 SYTL5Q8TDW5 730 aaPredicted RBP9.44□□□□□ -0.9
GTF3A-206ENST00000470606 DHX58Q96C10 678 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TIGD1Q96MW7 591 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 KCNMB3Q9NPA1 279 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 BTBD7Q9P203 1132 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 TRPM7Q96QT4 1865 aa9.44□□□□□ -0.9
GTF3A-206ENST00000470606 KIAA1217Q5T5P2 1943 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 LAD1O00515 517 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 CXCL11O14625 94 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ATP2A1O14983 1001 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 CYP3A4P08684 503 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 BMP6P22004 513 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 LONP1P36776 959 aaKnown RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 RPS6P62753 249 aaKnown RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 SPIRE1Q08AE8 756 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ORC2Q13416 577 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 KARSQ15046 597 aaKnown RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 PRR16Q569H4 304 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 SNRNP48Q6IEG0 339 aaKnown RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 LBX2Q6XYB7 198 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 GADL1Q6ZQY3 521 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 TRERF1Q96PN7 1200 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 TXNRD2Q9NNW7 524 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 KIAA1468Q9P260 1216 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 RPTORQ8N122 1335 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ZBED4O75132 1171 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 CNMDO75829 334 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ECM1Q16610 540 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 MOXD1Q6UVY6 613 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 STAMQ92783 540 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 TAAR1Q96RJ0 339 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 PLIN2Q99541 437 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ASCC2Q9H1I8 757 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 GBA2Q9HCG7 927 aaPredicted RBP9.43□□□□□ -0.9
GTF3A-206ENST00000470606 RNF146Q9NTX7 359 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 HOXC10Q9NYD6 342 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 TUBE1Q9UJT0 475 aa9.43□□□□□ -0.9
GTF3A-206ENST00000470606 ASTN1O14525 1302 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 ZNFX1Q9P2E3 1918 aaKnown RBP9.42□□□□□ -0.9
GTF3A-206ENST00000470606 BIN1O00499 593 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 CTAGE5O15320 804 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 MSH4O15457 936 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 SLFN14P0C7P3 912 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
GTF3A-206ENST00000470606 ITGB5P18084 799 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 OAZ1P54368 228 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 MRPS9P82933 396 aaKnown RBP9.42□□□□□ -0.9
GTF3A-206ENST00000470606 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
GTF3A-206ENST00000470606 TRAF1Q13077 416 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 Q4G0T1 1027 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 CNNM3Q8NE01 707 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 SLC10A4Q96EP9 437 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 CCSER1Q9C0I3 900 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 AGTPBP1Q9UPW5 1226 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
GTF3A-206ENST00000470606 FRMPD4Q14CM0 1322 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 MYPNQ86TC9 1320 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 CCDC192P0DO97 292 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 FDX1P10109 184 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 STAT3P40763 770 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
GTF3A-206ENST00000470606 BAATQ14032 418 aaPredicted RBP9.41□□□□□ -0.9
GTF3A-206ENST00000470606 Q3C1V9 767 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 DPCR1Q3MIW9 517 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 ANO6Q4KMQ2 910 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
GTF3A-206ENST00000470606 NSMFQ6X4W1 530 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms