RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
COL4A5-203ENST00000470339 MANSC4A6NHS7 340 aaPredicted RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 BTBD19C9JJ37 291 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 OR52Z1P0C646 297 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 ZNF157P51786 506 aaPredicted RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 FSTL1Q12841 308 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 Q4G0T1 1027 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 CCDC183Q5T5S1 534 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 RASAL3Q86YV0 1011 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 SYTL5Q8TDW5 730 aaPredicted RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 CLIC6Q96NY7 704 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 FAM13BQ9NYF5 915 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
COL4A5-203ENST00000470339 HPSEQ9Y251 543 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 RPTORQ8N122 1335 aa17.16■□□□□ 0.34
COL4A5-203ENST00000470339 PDHXO00330 501 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 TBX3O15119 743 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 TDP2O95551 362 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
COL4A5-203ENST00000470339 INHBEP58166 350 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
COL4A5-203ENST00000470339 SNW1Q13573 536 aaKnown RBP17.15■□□□□ 0.34
COL4A5-203ENST00000470339 PLS1Q14651 629 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 CALCRLQ16602 461 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 CCDC102AQ96A19 550 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 AK8Q96MA6 479 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 MRVI1Q9Y6F6 885 aa17.15■□□□□ 0.34
COL4A5-203ENST00000470339 ZNFX1Q9P2E3 1918 aaKnown RBP17.14■□□□□ 0.33
COL4A5-203ENST00000470339 A0A1B0GVL5 298 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 TMEM88BA6NKF7 163 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 NR1I2O75469 434 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 CNMDO75829 334 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 PFKFB1P16118 471 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 NDUFA8P51970 172 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 PDIA5Q14554 519 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 IL17AQ16552 155 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 XRRA1Q6P2D8 792 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 PFASO15067 1338 aa17.14■□□□□ 0.33
COL4A5-203ENST00000470339 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 SLC37A4O43826 429 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
COL4A5-203ENST00000470339 SLC10A3P09131 477 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL4A5-203ENST00000470339 GRIN1Q05586 938 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
COL4A5-203ENST00000470339 TPRNQ4KMQ1 711 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 NSMFQ6X4W1 530 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
COL4A5-203ENST00000470339 MOV10L1Q9BXT6 1211 aaKnown RBP17.13■□□□□ 0.33
COL4A5-203ENST00000470339 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 MROH8Q9H579 483 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 CYP39A1Q9NYL5 469 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 KCNH3Q9ULD8 1083 aa17.13■□□□□ 0.33
COL4A5-203ENST00000470339 CTAGE5O15320 804 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 ZNF202O95125 648 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 ZNF76P36508 570 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 SYKP43405 635 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 MKRN3Q13064 507 aaKnown RBP17.12■□□□□ 0.33
COL4A5-203ENST00000470339 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 PCNX4Q63HM2 1172 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 SLC30A10Q6XR72 485 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 ELOA2Q8IYF1 753 aaPredicted RBP17.12■□□□□ 0.33
COL4A5-203ENST00000470339 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
COL4A5-203ENST00000470339 PTPN18Q99952 460 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 PAGR1Q9BTK6 254 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 CLSTN2Q9H4D0 955 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
COL4A5-203ENST00000470339 MORF4L1Q9UBU8 362 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
COL4A5-203ENST00000470339 LCTP09848 1927 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 MEIS1O00470 390 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 BCRP11274 1271 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 ERVK-9P63128 1117 aa17.11■□□□□ 0.33
COL4A5-203ENST00000470339 ERVK-24P63145 666 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms