RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 PMF1-BGLAPU3KQ54 211 aa6.37□□□□□ -1.39
ITGA6-209ENST00000470259 OTOL1A6NHN0 477 aaPredicted RBP6.36□□□□□ -1.39
ITGA6-209ENST00000470259 ZBTB7AO95365 584 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 FBLN1P23142 703 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 PMLP29590 882 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 MC3RP41968 323 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 ECI1P42126 302 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 ARID5AQ03989 594 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 SYT8Q8NBV8 401 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 BTN2A2Q8WVV5 523 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 TSPAN17Q96FV3 270 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 MRGPRX3Q96LB0 322 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 MMP19Q99542 508 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 SIT1Q9Y3P8 196 aa6.36□□□□□ -1.39
ITGA6-209ENST00000470259 A0A0G2JLL6 359 aaPredicted RBP6.35□□□□□ -1.39
ITGA6-209ENST00000470259 PRRG2O14669 202 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 ITGAVP06756 1048 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 SNRPB2P08579 225 aaKnown RBP6.35□□□□□ -1.39
ITGA6-209ENST00000470259 DNAJA1P31689 397 aaKnown RBP6.35□□□□□ -1.39
ITGA6-209ENST00000470259 KCNJ6P48051 423 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 RBM25P49756 843 aaKnown RBP6.35□□□□□ -1.39
ITGA6-209ENST00000470259 NFIXQ14938 502 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 MBLAC2Q68D91 279 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 TEX2Q8IWB9 1127 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 ADGRG2Q8IZP9 1017 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 FRS2Q8WU20 508 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 AP5M1Q9H0R1 490 aa6.35□□□□□ -1.39
ITGA6-209ENST00000470259 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 C22orf46C9J442 243 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 FFAR3O14843 346 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 TBX1O43435 398 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 SUSD5O60279 629 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 KCNC1P48547 511 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
ITGA6-209ENST00000470259 INF2Q27J81 1249 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 IQCEQ6IPM2 695 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 B3GNT8Q7Z7M8 397 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 ZNF227Q86WZ6 799 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 DCP2Q8IU60 420 aaKnown RBP6.34□□□□□ -1.39
ITGA6-209ENST00000470259 FNIP1Q8TF40 1166 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 XYLT2Q9H1B5 865 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 LUC7LQ9NQ29 371 aaKnown RBP6.34□□□□□ -1.39
ITGA6-209ENST00000470259 ADAMTS20P59510 1910 aa6.34□□□□□ -1.39
ITGA6-209ENST00000470259 MEFVO15553 781 aaPredicted RBP6.33□□□□□ -1.4
ITGA6-209ENST00000470259 MYO1BO43795 1136 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
ITGA6-209ENST00000470259 HOXC12P31275 282 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 TP53I13Q8NBR0 393 aaPredicted RBP6.33□□□□□ -1.4
ITGA6-209ENST00000470259 SMARCC2Q8TAQ2 1214 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 PLEKHO2Q8TD55 490 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 MICAL1Q8TDZ2 1067 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 DPF3Q92784 378 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 DIO2Q92813 273 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 CHAMP1Q96JM3 812 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
ITGA6-209ENST00000470259 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
ITGA6-209ENST00000470259 NCANO14594 1321 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 A0A1B0GTL3 188 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 AGRPO00253 132 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 FOXD2O60548 495 aaPredicted RBP6.32□□□□□ -1.4
ITGA6-209ENST00000470259 SLURP1P55000 103 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 CAP1Q01518 475 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 CACNB2Q08289 660 aaPredicted RBP6.32□□□□□ -1.4
ITGA6-209ENST00000470259 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 E4F1Q66K89 784 aaPredicted RBP6.32□□□□□ -1.4
ITGA6-209ENST00000470259 CEP68Q76N32 757 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 ZNF526Q8TF50 670 aaPredicted RBP6.32□□□□□ -1.4
ITGA6-209ENST00000470259 TRMT2BQ96GJ1 504 aaKnown RBP6.32□□□□□ -1.4
ITGA6-209ENST00000470259 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
ITGA6-209ENST00000470259 GJB6O95452 261 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 CPP00450 1065 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 FGRP09769 529 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 SYN1P17600 705 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 FPR2P25090 351 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 BCL6P41182 706 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 KCNAB2Q13303 367 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 PPIL6Q8IXY8 311 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 CPA5Q8WXQ8 436 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 RTEL1Q9NZ71 1219 aa6.31□□□□□ -1.4
ITGA6-209ENST00000470259 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
ITGA6-209ENST00000470259 CYP2C8P10632 490 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 BUD31P41223 144 aaPredicted RBP6.3□□□□□ -1.4
ITGA6-209ENST00000470259 GTF2A2P52657 109 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 CYP4F3Q08477 520 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
ITGA6-209ENST00000470259 PRSS53Q2L4Q9 553 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 VWA3BQ502W6 1294 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 MRM1Q6IN84 353 aaKnown RBP6.3□□□□□ -1.4
ITGA6-209ENST00000470259 LIPIQ6XZB0 460 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 MILR1Q7Z6M3 343 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
ITGA6-209ENST00000470259 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
ITGA6-209ENST00000470259 ZBTB8AQ96BR9 441 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms