RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CYP26B1Q9NR63 512 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.69□□□□□ -1.02
COL11A1-208ENST00000470170 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 NUDT5Q9UKK9 219 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 SIT1Q9Y3P8 196 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 SUSD5O60279 629 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 SASH1O94885 1247 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
COL11A1-208ENST00000470170 NTRK1P04629 796 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 ITGAVP06756 1048 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 NCAM1P13591 858 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 ZNF227Q86WZ6 799 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 TP53I13Q8NBR0 393 aaPredicted RBP8.68□□□□□ -1.02
COL11A1-208ENST00000470170 FRS2Q8WU20 508 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 DPF3Q92784 378 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 PEX11GQ96HA9 241 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 BTG4Q9NY30 223 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 LRP2BPQ9P2M1 347 aa8.68□□□□□ -1.02
COL11A1-208ENST00000470170 OTOL1A6NHN0 477 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-208ENST00000470170 FFAR3O14843 346 aa8.67□□□□□ -1.02
COL11A1-208ENST00000470170 NLGN1Q8N2Q7 840 aa8.67□□□□□ -1.02
COL11A1-208ENST00000470170 NPLOC4Q8TAT6 608 aa8.67□□□□□ -1.02
COL11A1-208ENST00000470170 PLEKHO2Q8TD55 490 aa8.67□□□□□ -1.02
COL11A1-208ENST00000470170 ARID5AQ03989 594 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 FXNQ16595 210 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 VWA3BQ502W6 1294 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 MCF2L2Q86YR7 1114 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 TEX2Q8IWB9 1127 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 FNIP1Q8TF40 1166 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 KRTAP4-9Q9BYQ8 210 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 PMF1-BGLAPU3KQ54 211 aa8.66□□□□□ -1.02
COL11A1-208ENST00000470170 SNRPB2P08579 225 aaKnown RBP8.65□□□□□ -1.02
COL11A1-208ENST00000470170 DNAJA1P31689 397 aaKnown RBP8.65□□□□□ -1.02
COL11A1-208ENST00000470170 ECI1P42126 302 aa8.65□□□□□ -1.02
COL11A1-208ENST00000470170 RBM25P49756 843 aaKnown RBP8.65□□□□□ -1.02
COL11A1-208ENST00000470170 SF1Q15637 639 aaKnown RBP8.65□□□□□ -1.02
COL11A1-208ENST00000470170 SP8Q8IXZ3 490 aa8.65□□□□□ -1.02
COL11A1-208ENST00000470170 ZDHHC14Q8IZN3 488 aa8.65□□□□□ -1.02
COL11A1-208ENST00000470170 ADGRG2Q8IZP9 1017 aa8.65□□□□□ -1.02
COL11A1-208ENST00000470170 TMEFF2Q9UIK5 374 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-208ENST00000470170 A0A1B0GTL3 188 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 B8ZZF3 427 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 GJB6O95452 261 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 SLC9A5Q14940 896 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 PRSS53Q2L4Q9 553 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 B3GNT8Q7Z7M8 397 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 CCDC103Q8IW40 242 aa8.64□□□□□ -1.03
COL11A1-208ENST00000470170 LUC7LQ9NQ29 371 aaKnown RBP8.64□□□□□ -1.03
COL11A1-208ENST00000470170 NCANO14594 1321 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 C22orf46C9J442 243 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 ARNTLO00327 626 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 ZBTB7AO95365 584 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 FPR2P25090 351 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 HOXC12P31275 282 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 HTRA3P83110 453 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 CAP1Q01518 475 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 SMARCC2Q8TAQ2 1214 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 HNRNPLLQ8WVV9 542 aaKnown RBP8.63□□□□□ -1.03
COL11A1-208ENST00000470170 RELTQ969Z4 430 aa8.63□□□□□ -1.03
COL11A1-208ENST00000470170 PRRG2O14669 202 aa8.62□□□□□ -1.03
COL11A1-208ENST00000470170 NFIXQ14938 502 aa8.62□□□□□ -1.03
COL11A1-208ENST00000470170 DCP2Q8IU60 420 aaKnown RBP8.62□□□□□ -1.03
COL11A1-208ENST00000470170 ZNF526Q8TF50 670 aaPredicted RBP8.62□□□□□ -1.03
COL11A1-208ENST00000470170 RTEL1Q9NZ71 1219 aa8.62□□□□□ -1.03
COL11A1-208ENST00000470170 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-208ENST00000470170 SCG5P05408 212 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 KCNJ6P48051 423 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 SLURP1P55000 103 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-208ENST00000470170 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-208ENST00000470170 SAPCD2Q86UD0 394 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 CELF2-AS1Q8N7Q2 184 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 KREMEN2Q8NCW0 462 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 CPA5Q8WXQ8 436 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 DIO2Q92813 273 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 ST7Q9NRC1 585 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 FBXL7Q9UJT9 491 aa8.61□□□□□ -1.03
COL11A1-208ENST00000470170 TIMM13Q9Y5L4 95 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-208ENST00000470170 GFRA1P56159 465 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
COL11A1-208ENST00000470170 DLX2Q07687 328 aaPredicted RBP8.6□□□□□ -1.03
COL11A1-208ENST00000470170 SLC10A6Q3KNW5 377 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 IQCEQ6IPM2 695 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 LIPIQ6XZB0 460 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 EEPD1Q7L9B9 569 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 AP5M1Q9H0R1 490 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 ADAM7Q9H2U9 754 aa8.6□□□□□ -1.03
COL11A1-208ENST00000470170 SGSM2O43147 1006 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 FOXD2O60548 495 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-208ENST00000470170 BCL6P41182 706 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 BUD31P41223 144 aaPredicted RBP8.59□□□□□ -1.03
COL11A1-208ENST00000470170 KCNAB2Q13303 367 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 DENND5AQ6IQ26 1287 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 CEP68Q76N32 757 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 PPIL6Q8IXY8 311 aa8.59□□□□□ -1.03
COL11A1-208ENST00000470170 TMEM145Q8NBT3 493 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms