RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 INSL6Q9Y581 213 aa14.31□□□□□ -0.12
LSM2-209ENST00000470083 BAZ2AQ9UIF9 1905 aaKnown RBP14.31□□□□□ -0.12
LSM2-209ENST00000470083 NKRFO15226 690 aaKnown RBP eCLIP14.3□□□□□ -0.12
LSM2-209ENST00000470083 GFRA3O60609 400 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 NBNO60934 754 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 RBL2Q08999 1139 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 PKN1Q16512 942 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 TCEAL5Q5H9L2 206 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 IER5LQ5T953 404 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
LSM2-209ENST00000470083 PURBQ96QR8 312 aaKnown RBP14.3□□□□□ -0.12
LSM2-209ENST00000470083 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
LSM2-209ENST00000470083 TECTAO75443 2155 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 PTPRZ1P23471 2315 aaPredicted RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 CHGBP05060 677 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 ALDH5A1P51649 535 aaPredicted RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 TCF15Q12870 199 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 IKBKEQ14164 716 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 TCTN1Q2MV58 587 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 FAM117BQ6P1L5 589 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 EP400NLQ6ZTU2 488 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 RHPN1Q8TCX5 695 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 EDAQ92838 391 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
LSM2-209ENST00000470083 SPTBN4Q9H254 2564 aa14.29□□□□□ -0.12
LSM2-209ENST00000470083 PLA2G6O60733 806 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 SLC1A4P43007 532 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 SMAD2Q15796 467 aaKnown RBP14.28□□□□□ -0.12
LSM2-209ENST00000470083 EPC2Q52LR7 807 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 CLASRPQ8N2M8 674 aaKnown RBP14.28□□□□□ -0.12
LSM2-209ENST00000470083 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
LSM2-209ENST00000470083 SAMD11Q96NU1 681 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
LSM2-209ENST00000470083 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
LSM2-209ENST00000470083 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
LSM2-209ENST00000470083 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
LSM2-209ENST00000470083 H3BNC9 293 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 NCK2O43639 380 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
LSM2-209ENST00000470083 CKBP12277 381 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
LSM2-209ENST00000470083 BAATQ14032 418 aaPredicted RBP14.27□□□□□ -0.13
LSM2-209ENST00000470083 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.13
LSM2-209ENST00000470083 RNF135Q8IUD6 432 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
LSM2-209ENST00000470083 SCFD2Q8WU76 684 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 CLDND1Q9NY35 253 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 CCPG1Q9ULG6 757 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 SIP14410 1827 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 MYO15AQ9UKN7 3530 aa14.27□□□□□ -0.13
LSM2-209ENST00000470083 TMEM221A6NGB7 291 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 MINDY4BA8MYZ0 360 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 M0R296 226 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 PRDM1O75626 825 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 LTBRP36941 435 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 SNAP25P60880 206 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 SUGP1Q8IWZ8 645 aaKnown RBP14.26□□□□□ -0.13
LSM2-209ENST00000470083 COPS5Q92905 334 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 STRBPQ96SI9 672 aaKnown RBP14.26□□□□□ -0.13
LSM2-209ENST00000470083 HAUS7Q99871 368 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
LSM2-209ENST00000470083 ICAM1P05362 532 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 ATP5JP18859 108 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 MCCP23508 829 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
LSM2-209ENST00000470083 GPM6BQ13491 265 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 CTC1Q2NKJ3 1217 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 ZSCAN25Q6NSZ9 544 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
LSM2-209ENST00000470083 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 PRR12Q9ULL5 1215 aa14.25□□□□□ -0.13
LSM2-209ENST00000470083 DCHS1Q96JQ0 3298 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
LSM2-209ENST00000470083 MBTPS2O43462 519 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 AMHP03971 560 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 EDNRBP24530 442 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 PDE4DQ08499 809 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 KCTD1Q719H9 257 aa14.24□□□□□ -0.13
LSM2-209ENST00000470083 FBXO11Q86XK2 927 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms