RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 TRIM43Q96BQ3 446 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 LBHD1Q9BQE6 289 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-208ENST00000470045 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
COMMD3-208ENST00000470045 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
COMMD3-208ENST00000470045 CABYRO75952 493 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 NEFLP07196 543 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 FAAP100Q0VG06 881 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-208ENST00000470045 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
COMMD3-208ENST00000470045 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-208ENST00000470045 ARVCFO00192 962 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
COMMD3-208ENST00000470045 CFBP00751 764 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 KIF5BP33176 963 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 TBX21Q9UL17 535 aa16.31■□□□□ 0.2
COMMD3-208ENST00000470045 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 ZEB2O60315 1214 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 ARIH2O95376 493 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 CALM1P0DP23 149 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 CALM2P0DP24 149 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 CALM3P0DP25 149 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 ITGB8P26012 769 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
COMMD3-208ENST00000470045 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 BADQ92934 168 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 KCNB2Q92953 911 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
COMMD3-208ENST00000470045 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
COMMD3-208ENST00000470045 GNAQP50148 359 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 CPT1AP50416 773 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 STXBP2Q15833 593 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 ADCK5Q3MIX3 580 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 ARHGEF16Q5VV41 709 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
COMMD3-208ENST00000470045 A6NJR5 290 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 CD4P01730 458 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 NR3C2P08235 984 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
COMMD3-208ENST00000470045 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
COMMD3-208ENST00000470045 KRT32Q14532 448 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 APOA5Q6Q788 366 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
COMMD3-208ENST00000470045 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
COMMD3-208ENST00000470045 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 COPS5Q92905 334 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
COMMD3-208ENST00000470045 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 GCOM1H8Y6P7 765 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-208ENST00000470045 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
COMMD3-208ENST00000470045 POLR2MP0CAP2 368 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 RAG1P15918 1043 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 RXRAP19793 462 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-208ENST00000470045 HSPA4P34932 840 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 ITGA7Q13683 1181 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 GPR153Q6NV75 609 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.2
COMMD3-208ENST00000470045 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.2
COMMD3-208ENST00000470045 RGS20O76081 388 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 PGM5Q15124 567 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 TMTC3Q6ZXV5 915 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms