RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ANTXR2P58335 489 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 RASIP1Q5U651 963 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 CCDC62Q6P9F0 684 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 RALYLQ86SE5 291 aaKnown RBP18.99■□□□□ 0.63
COL9A3-208ENST00000469802 MB21D2Q8IYB1 491 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-208ENST00000469802 OR6J1Q8NGC5 347 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 NCOA7Q8NI08 942 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 NSUN6Q8TEA1 469 aaKnown RBP18.99■□□□□ 0.63
COL9A3-208ENST00000469802 TAAR1Q96RJ0 339 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.99■□□□□ 0.632e-16■□□□□ 9
COL9A3-208ENST00000469802 AMNQ9BXJ7 453 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 VAT1LQ9HCJ6 419 aa18.99■□□□□ 0.63
COL9A3-208ENST00000469802 A6NJR5 290 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 ZBTB5O15062 677 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 CSF2RAP15509 400 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 HSD17B4P51659 736 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 TROAPQ12815 778 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 TTLL4Q14679 1199 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 TMEM199Q8N511 208 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 COPS5Q92905 334 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 IWS1Q96ST2 819 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 NOC4LQ9BVI4 516 aaKnown RBP18.98■□□□□ 0.63
COL9A3-208ENST00000469802 ALDH8A1Q9H2A2 487 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-208ENST00000469802 RBM8AQ9Y5S9 174 aaKnown RBP18.98■□□□□ 0.63
COL9A3-208ENST00000469802 UMODL1Q5DID0 1318 aa18.98■□□□□ 0.63
COL9A3-208ENST00000469802 IFIT3O14879 490 aaKnown RBP18.97■□□□□ 0.63
COL9A3-208ENST00000469802 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
COL9A3-208ENST00000469802 CYP2C18P33260 490 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 RMDN3Q96TC7 470 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 MTG1Q9BT17 334 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-208ENST00000469802 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 TTYH1Q9H313 450 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-208ENST00000469802 HIPK3Q9H422 1215 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 RIOX1Q9H6W3 641 aa18.97■□□□□ 0.63
COL9A3-208ENST00000469802 TMEM265A0A087WTH1 108 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 CYTH3O43739 400 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 WTAPQ15007 396 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 PSRC1Q6PGN9 363 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-208ENST00000469802 IGDCC4Q8TDY8 1250 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 FAM161BQ96MY7 647 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 LSG1Q9H089 658 aaKnown RBP18.96■□□□□ 0.63
COL9A3-208ENST00000469802 WNT8AQ9H1J5 351 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 PXMP2Q9NR77 195 aa18.96■□□□□ 0.63
COL9A3-208ENST00000469802 MAP3K20Q9NYL2 800 aaKnown RBP18.96■□□□□ 0.63
COL9A3-208ENST00000469802 ERICH2A1L162 156 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 KPNA6O60684 536 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 MYL3P08590 195 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 ARHGAP1Q07960 439 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 SART3Q15020 963 aaKnown RBP18.95■□□□□ 0.62
COL9A3-208ENST00000469802 STXBP2Q15833 593 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 BRDTQ58F21 947 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-208ENST00000469802 CHST3Q7LGC8 479 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 SEMA6BQ9H3T3 888 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 IL23AQ9NPF7 189 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 PCDHA1Q9Y5I3 950 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 TRIP12Q14669 1992 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-208ENST00000469802 EYSQ5T1H1 3165 aa18.95■□□□□ 0.62
COL9A3-208ENST00000469802 DOCK5Q9H7D0 1870 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-208ENST00000469802 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-208ENST00000469802 CFBP00751 764 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
COL9A3-208ENST00000469802 TMEM67Q5HYA8 995 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 SAMD3Q8N6K7 520 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 PIGSQ96S52 555 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 MTA3Q9BTC8 594 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 LY9Q9HBG7 655 aa18.94■□□□□ 0.62
COL9A3-208ENST00000469802 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
COL9A3-208ENST00000469802 NR3C2P08235 984 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 MMP3P08254 477 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 ACRP10323 421 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 ARHGEF16Q5VV41 709 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 NFRKBQ6P4R8 1299 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 SEPT14Q6ZU15 432 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 ZNF365Q70YC5 407 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 SLC17A8Q8NDX2 589 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 MAP3K14Q99558 947 aa18.93■□□□□ 0.62
COL9A3-208ENST00000469802 CDX2Q99626 313 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-208ENST00000469802 UNC80Q8N2C7 3258 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 CHD9Q3L8U1 2897 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 EIF3JO75822 258 aaKnown RBP18.92■□□□□ 0.62
COL9A3-208ENST00000469802 GH1P01241 217 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 SUPT20HL2P0C7V6 817 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 DNAJB2P25686 324 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 TRAF1Q13077 416 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-208ENST00000469802 LY6KQ17RY6 165 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 NBPF20Q3BBV1 942 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 BMP2KLQ5H9B9 411 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 AFG1LQ8WV93 481 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 HERVK_113Q902F9 699 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 EMID1Q96A84 441 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-208ENST00000469802 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
COL9A3-208ENST00000469802 GPHNQ9NQX3 736 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-208ENST00000469802 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms