RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 OPA1O60313 960 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 PPP1R11O60927 126 aaPredicted RBP5.89□□□□□ -1.47
VPS8-220ENST00000469713 BCL6P41182 706 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 RTP1P59025 263 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 ERVFC1P60507 584 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 RPL11P62913 178 aaKnown RBP5.89□□□□□ -1.47
VPS8-220ENST00000469713 LRP8Q14114 963 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 KIR3DS1Q14943 382 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 HSF5Q4G112 596 aaPredicted RBP5.89□□□□□ -1.47
VPS8-220ENST00000469713 LRRTM3Q86VH5 581 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 THNSL2Q86YJ6 484 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 ANKS4BQ8N8V4 417 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 PDZD8Q8NEN9 1154 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 CHAMP1Q96JM3 812 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
VPS8-220ENST00000469713 INTS7Q9NVH2 962 aaKnown RBP5.89□□□□□ -1.47
VPS8-220ENST00000469713 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 NOTOA8MTQ0 251 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 GSG1L2A8MUP6 293 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 ARVCFO00192 962 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 HYAL3O43820 417 aaPredicted RBP5.88□□□□□ -1.47
VPS8-220ENST00000469713 PDE8AO60658 829 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 EFEMP2O95967 443 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 ASLP04424 464 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 RNASE1P07998 156 aaKnown RBP5.88□□□□□ -1.47
VPS8-220ENST00000469713 IGFALSP35858 605 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 CHRNEQ04844 493 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 SLC14A2Q15849 920 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 PTPROQ16827 1216 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 KIZQ2M2Z5 673 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 AGBL5Q8NDL9 886 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 CCDC120Q96HB5 630 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 PLCD4Q9BRC7 762 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 ALG1Q9BT22 464 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 SP110Q9HB58 689 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 RWDD3Q9Y3V2 267 aa5.88□□□□□ -1.47
VPS8-220ENST00000469713 WTIPA6NIX2 430 aaPredicted RBP5.87□□□□□ -1.47
VPS8-220ENST00000469713 NRDCO43847 1150 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 HPXP02790 462 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 SOD2P04179 222 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 VIL1P09327 827 aaKnown RBP5.87□□□□□ -1.47
VPS8-220ENST00000469713 MSL3P1P0C860 447 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 KCNA6P17658 529 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 NAT1P18440 290 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 FPR2P25090 351 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 GRK2P25098 689 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 TRHRP34981 398 aaPredicted RBP5.87□□□□□ -1.47
VPS8-220ENST00000469713 GRK3P35626 688 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 GDNFP39905 211 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 PAK1Q13153 545 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 LSAMPQ13449 338 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 ZNF792Q3KQV3 632 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 TIGD5Q53EQ6 642 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 SPPL2CQ8IUH8 684 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 ZC3H7AQ8IWR0 971 aaKnown RBP5.87□□□□□ -1.47
VPS8-220ENST00000469713 OXR1Q8N573 874 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 UBR7Q8N806 425 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 PCDH19Q8TAB3 1148 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 DDX1Q92499 740 aaKnown RBP5.87□□□□□ -1.47
VPS8-220ENST00000469713 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 TMX1Q9H3N1 280 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 C19orf44Q9H6X5 657 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 IPPKQ9H8X2 491 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 MARCH2Q9P0N8 246 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 FBLN5Q9UBX5 448 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 COL4A3BPQ9Y5P4 624 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
VPS8-220ENST00000469713 FITM1A5D6W6 292 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 PSPNO60542 156 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 KPNA6O60684 536 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 FUCA1P04066 466 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 JMJD7P0C870 316 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 TACR1P25103 407 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 STAT3P40763 770 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 GTF2A2P52657 109 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 MVKQ03426 396 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 GALNT18Q6P9A2 607 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 CEP68Q76N32 757 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 KRT26Q7Z3Y9 468 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 RNF180Q86T96 592 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 NUP43Q8NFH3 380 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 CHAC2Q8WUX2 184 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 ASIC4Q96FT7 647 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 TMEM169Q96HH4 297 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 MTA3Q9BTC8 594 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 RC3H2Q9HBD1 1191 aaKnown RBP5.86□□□□□ -1.47
VPS8-220ENST00000469713 PCDH12Q9NPG4 1184 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 CTNND2Q9UQB3 1225 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 COQ6Q9Y2Z9 468 aa5.86□□□□□ -1.47
VPS8-220ENST00000469713 A0A1W2PQ27 194 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 A0A1W2PQ64 194 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 A0A1W2PQC6 194 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms