RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 DCAF4Q8WV16 495 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 COPS5Q92905 334 aa21.57■■□□□ 1.04
TTC28-205ENST00000469670 WDR5P61964 334 aaKnown RBP21.56■■□□□ 1.04
TTC28-205ENST00000469670 PDE4DQ08499 809 aa21.56■■□□□ 1.04
TTC28-205ENST00000469670 TMCO2Q7Z6W1 182 aaPredicted RBP21.56■■□□□ 1.04
TTC28-205ENST00000469670 SCFD2Q8WU76 684 aa21.56■■□□□ 1.04
TTC28-205ENST00000469670 ZBED2Q9BTP6 218 aa21.56■■□□□ 1.04
TTC28-205ENST00000469670 INCENPQ9NQS7 918 aa21.56■■□□□ 1.04
TTC28-205ENST00000469670 CHMP4BP1P59074 171 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 PTGISQ16647 500 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 SYDE2Q5VT97 1194 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 BTNL9Q6UXG8 535 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 RNF207Q6ZRF8 634 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 CCDC155Q8N6L0 562 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 CAGE1Q8TC20 777 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 AFAP1L1Q8TED9 768 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 MPHOSPH6Q99547 160 aaKnown RBP21.55■■□□□ 1.04
TTC28-205ENST00000469670 SCN10AQ9Y5Y9 1956 aa21.55■■□□□ 1.04
TTC28-205ENST00000469670 EDNRBP24530 442 aa21.54■■□□□ 1.04
TTC28-205ENST00000469670 NOVP48745 357 aa21.54■■□□□ 1.04
TTC28-205ENST00000469670 CTDSPL2Q05D32 466 aa21.54■■□□□ 1.04
TTC28-205ENST00000469670 CLEC4DQ8WXI8 215 aa21.54■■□□□ 1.04
TTC28-205ENST00000469670 UBE2ZQ9H832 354 aaPredicted RBP21.54■■□□□ 1.04
TTC28-205ENST00000469670 TANC1Q9C0D5 1861 aa21.54■■□□□ 1.04
TTC28-205ENST00000469670 RANBP6O60518 1105 aaKnown RBP21.53■■□□□ 1.04
TTC28-205ENST00000469670 TXNP10599 105 aaKnown RBP21.53■■□□□ 1.04
TTC28-205ENST00000469670 DEFB103AP81534 67 aa21.53■■□□□ 1.04
TTC28-205ENST00000469670 GPNMBQ14956 572 aa21.53■■□□□ 1.04
TTC28-205ENST00000469670 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
TTC28-205ENST00000469670 MTUS1Q9ULD2 1270 aa21.53■■□□□ 1.04
TTC28-205ENST00000469670 COL4A4P53420 1690 aaPredicted RBP21.53■■□□□ 1.04
TTC28-205ENST00000469670 RPS6P62753 249 aaKnown RBP21.52■■□□□ 1.04
TTC28-205ENST00000469670 ZMYM1Q5SVZ6 1142 aa21.52■■□□□ 1.04
TTC28-205ENST00000469670 CNKSR3Q6P9H4 555 aa21.52■■□□□ 1.04
TTC28-205ENST00000469670 DNERQ8NFT8 737 aa21.52■■□□□ 1.04
TTC28-205ENST00000469670 CTAGE1Q96RT6 745 aa21.52■■□□□ 1.04
TTC28-205ENST00000469670 FRMPD2Q68DX3 1309 aaPredicted RBP21.52■■□□□ 1.03
TTC28-205ENST00000469670 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.51■■□□□ 1.03
TTC28-205ENST00000469670 PRR33A8MZF0 331 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 ARIH2O95376 493 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 SELPP16109 830 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 ERVK-21P61565 698 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 GDF6Q6KF10 455 aaPredicted RBP21.51■■□□□ 1.03
TTC28-205ENST00000469670 LRRC8DQ7L1W4 858 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 ALYREFQ86V81 257 aaKnown RBP21.51■■□□□ 1.03
TTC28-205ENST00000469670 GJD3Q8N144 294 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 TGS1Q96RS0 853 aaKnown RBP21.51■■□□□ 1.03
TTC28-205ENST00000469670 RAD9AQ99638 391 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 FSD1Q9BTV5 496 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 GPCPD1Q9NPB8 672 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 PNMA2Q9UL42 364 aa21.51■■□□□ 1.03
TTC28-205ENST00000469670 PIEZO1Q92508 2521 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 FOXP2O15409 715 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 GJB5O95377 273 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 PARNO95453 639 aaKnown RBP21.5■■□□□ 1.03
TTC28-205ENST00000469670 LEXMQ3ZCV2 418 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 SESTD1Q86VW0 696 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 FAM178BQ8IXR5 827 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 DHX38Q92620 1227 aaKnown RBP21.5■■□□□ 1.03
TTC28-205ENST00000469670 DCTPP1Q9H773 170 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 TET1Q8NFU7 2136 aa21.5■■□□□ 1.03
TTC28-205ENST00000469670 LINC01553A4QN01 128 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 B4DLN1 442 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 NBNO60934 754 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 CXCL10P02778 98 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 KCNA5P22460 613 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
TTC28-205ENST00000469670 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.49■■□□□ 1.03
TTC28-205ENST00000469670 AFG1LQ8WV93 481 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 TMEM47Q9BQJ4 181 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 ANAPC4Q9UJX5 808 aa21.49■■□□□ 1.03
TTC28-205ENST00000469670 MUC6Q6W4X9 2439 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 ABHD14A-ACY1A0A1B0GW23 586 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 ORC4O43929 436 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 MMP3P08254 477 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 TOP1P11387 765 aaKnown RBP21.48■■□□□ 1.03
TTC28-205ENST00000469670 RBL2Q08999 1139 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 TCTN1Q2MV58 587 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 CCDC62Q6P9F0 684 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 TTC41PQ6P2S7 1318 aa21.48■■□□□ 1.03
TTC28-205ENST00000469670 CKBP12277 381 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 IL9P15248 144 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 SSTR3P32745 418 aaPredicted RBP21.47■■□□□ 1.03
TTC28-205ENST00000469670 PI4K2BQ8TCG2 481 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 KAT2BQ92831 832 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 CRBNQ96SW2 442 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 WDR19Q8NEZ3 1342 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 PTPRSQ13332 1948 aa21.47■■□□□ 1.03
TTC28-205ENST00000469670 EFCAB14O75071 495 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 GH1P01241 217 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 FGRP09769 529 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 PDHBP11177 359 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 ARHGAP1Q07960 439 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 IKBKEQ14164 716 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 FAM117BQ6P1L5 589 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
TTC28-205ENST00000469670 BRWD1Q9NSI6 2320 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 ALADP13716 330 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
TTC28-205ENST00000469670 LY6KQ17RY6 165 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms