RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 TRIM43Q96BQ3 446 aaPredicted RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 RMDN3Q96TC7 470 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 MAP3K20Q9NYL2 800 aaKnown RBP21.21■□□□□ 0.99
PHGDH-204ENST00000469443 MROH7Q68CQ1 1323 aa21.21■□□□□ 0.99
PHGDH-204ENST00000469443 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 DCDC2CA8MYV0 355 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 ARVCFO00192 962 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 KIF5BP33176 963 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 CDK7P50613 346 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 HSD17B4P51659 736 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 IWS1Q96ST2 819 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 MYL10Q9BUA6 226 aa21.2■□□□□ 0.98
PHGDH-204ENST00000469443 NKRFO15226 690 aaKnown RBP eCLIP21.19■□□□□ 0.98
PHGDH-204ENST00000469443 FAAP100Q0VG06 881 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 PPP2R5BQ15173 497 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 CXCL17Q6UXB2 119 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 SAMD3Q8N6K7 520 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 BADQ92934 168 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 SPZ1Q9BXG8 430 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 SCN10AQ9Y5Y9 1956 aa21.19■□□□□ 0.98
PHGDH-204ENST00000469443 SOX1O00570 391 aaPredicted RBP21.18■□□□□ 0.98
PHGDH-204ENST00000469443 KIAA0355O15063 1070 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 SMARCA1P28370 1054 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 STXBP2Q15833 593 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 TSGA10IPQ3SY00 556 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 ARHGEF16Q5VV41 709 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 OR6J1Q8NGC5 347 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 NEK1Q96PY6 1258 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 LZTS2Q9BRK4 669 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 LRRC2Q9BYS8 371 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 PXMP2Q9NR77 195 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 TMEM39AQ9NV64 488 aa21.18■□□□□ 0.98
PHGDH-204ENST00000469443 CALM1P0DP23 149 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 CALM2P0DP24 149 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 CALM3P0DP25 149 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 TXNP10599 105 aaKnown RBP21.17■□□□□ 0.98
PHGDH-204ENST00000469443 EIF2AK2P19525 551 aaKnown RBP21.17■□□□□ 0.98
PHGDH-204ENST00000469443 GNAQP50148 359 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 CPT1AP50416 773 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 TTLL4Q14679 1199 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 LRIT3Q3SXY7 679 aa21.17■□□□□ 0.98
PHGDH-204ENST00000469443 RAG1P15918 1043 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 KRT32Q14532 448 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 SGMS1Q86VZ5 419 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 FAM126BQ8IXS8 530 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 RASEFQ8IZ41 740 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 SLC43A3Q8NBI5 491 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 PIBF1Q8WXW3 757 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 SEZ6LQ9BYH1 1024 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 POLR3EQ9NVU0 708 aa21.16■□□□□ 0.98
PHGDH-204ENST00000469443 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-204ENST00000469443 TLR3O15455 904 aaKnown RBP21.15■□□□□ 0.98
PHGDH-204ENST00000469443 ARIH2O95376 493 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 NR3C2P08235 984 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 POLR2MP0CAP2 368 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 ITGB8P26012 769 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 HOXA13P31271 388 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-204ENST00000469443 ITGA7Q13683 1181 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 BRDTQ58F21 947 aaPredicted RBP21.15■□□□□ 0.98
PHGDH-204ENST00000469443 CCDC62Q6P9F0 684 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 COPS5Q92905 334 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 RRP36Q96EU6 259 aaKnown RBP21.15■□□□□ 0.98
PHGDH-204ENST00000469443 LRCH3Q96II8 777 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 TBX21Q9UL17 535 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 SLC12A7Q9Y666 1083 aa21.15■□□□□ 0.98
PHGDH-204ENST00000469443 GRIN2DO15399 1336 aa21.14■□□□□ 0.97
PHGDH-204ENST00000469443 EIF3JO75822 258 aaKnown RBP21.14■□□□□ 0.97
PHGDH-204ENST00000469443 PLEKHA8P1O95397 391 aa21.14■□□□□ 0.97
PHGDH-204ENST00000469443 RXRAP19793 462 aa21.14■□□□□ 0.97
PHGDH-204ENST00000469443 EXOSC10Q01780 885 aaKnown RBP21.14■□□□□ 0.97
PHGDH-204ENST00000469443 SEPT14Q6ZU15 432 aa21.14■□□□□ 0.97
PHGDH-204ENST00000469443 DHX32Q7L7V1 743 aaKnown RBP21.14■□□□□ 0.97
PHGDH-204ENST00000469443 SRBD1Q8N5C6 995 aaKnown RBP21.14■□□□□ 0.97
PHGDH-204ENST00000469443 PDCD2LQ9BRP1 358 aa21.14■□□□□ 0.97
PHGDH-204ENST00000469443 A6NJR5 290 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 CD4P01730 458 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 ADCK5Q3MIX3 580 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 SYNE3Q6ZMZ3 975 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 RAB11FIP4Q86YS3 637 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 FANCBQ8NB91 859 aa21.13■□□□□ 0.97
PHGDH-204ENST00000469443 SEC63Q9UGP8 760 aaKnown RBP21.13■□□□□ 0.97
PHGDH-204ENST00000469443 TIMP1P01033 207 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 MYL3P08590 195 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 PSMC6P62333 389 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 PURAQ00577 322 aaKnown RBP21.12■□□□□ 0.97
PHGDH-204ENST00000469443 PGM5Q15124 567 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 FCHSD1Q86WN1 690 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 MICU3Q86XE3 530 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 KCNB2Q92953 911 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 TCEANC2Q96MN5 208 aa21.12■□□□□ 0.97
PHGDH-204ENST00000469443 MTG1Q9BT17 334 aaPredicted RBP21.12■□□□□ 0.97
PHGDH-204ENST00000469443 DOCK5Q9H7D0 1870 aa21.11■□□□□ 0.97
PHGDH-204ENST00000469443 KPNA6O60684 536 aa21.11■□□□□ 0.97
PHGDH-204ENST00000469443 GH1P01241 217 aa21.11■□□□□ 0.97
PHGDH-204ENST00000469443 HMGB1P09429 215 aaKnown RBP21.11■□□□□ 0.97
PHGDH-204ENST00000469443 MYCLP12524 364 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-204ENST00000469443 SHHQ15465 462 aa21.11■□□□□ 0.97
PHGDH-204ENST00000469443 LY6KQ17RY6 165 aa21.11■□□□□ 0.97
PHGDH-204ENST00000469443 ERICH6BQ5W0A0 696 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms