RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 ZNF713Q8N859 430 aaPredicted RBP18.98■□□□□ 0.63
CBX6-203ENST00000469420 MSANTD4Q8NCY6 345 aa18.98■□□□□ 0.63
CBX6-203ENST00000469420 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
CBX6-203ENST00000469420 HAUS4Q9H6D7 363 aa18.98■□□□□ 0.63
CBX6-203ENST00000469420 KCNQ5Q9NR82 932 aa18.98■□□□□ 0.63
CBX6-203ENST00000469420 MYO6Q9UM54 1294 aa18.98■□□□□ 0.63
CBX6-203ENST00000469420 ENC1O14682 589 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 RHOXF2BP0C7M4 288 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 OAS2P29728 719 aaKnown RBP18.97■□□□□ 0.63
CBX6-203ENST00000469420 SV2BQ7L1I2 683 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 COL23A1Q86Y22 540 aaPredicted RBP18.97■□□□□ 0.63
CBX6-203ENST00000469420 RHOXF2Q9BQY4 288 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 PCDHAC2Q9Y5I4 1007 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 CTAGE15A4D2H0 777 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 CTAGE8P0CG41 777 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 SNHG28P0DPA3 235 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 TNNI2P48788 182 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 FXR2P51116 673 aaKnown RBP eCLIP18.97■□□□□ 0.63
CBX6-203ENST00000469420 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
CBX6-203ENST00000469420 UBE2SQ16763 222 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 CCDC122Q5T0U0 273 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 DYMQ7RTS9 669 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 CTAGE6Q86UF2 777 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 CTAGE4Q8IX94 777 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 LARP4BQ92615 738 aaKnown RBP18.97■□□□□ 0.63
CBX6-203ENST00000469420 COA1Q9GZY4 146 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 HDAC6Q9UBN7 1215 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 RAB21Q9UL25 225 aa18.97■□□□□ 0.63
CBX6-203ENST00000469420 PPP1R11O60927 126 aaPredicted RBP18.96■□□□□ 0.63
CBX6-203ENST00000469420 PPP1R2P41236 205 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 TMEM266Q2M3C6 531 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 SHROOM1Q2M3G4 852 aaPredicted RBP18.96■□□□□ 0.63
CBX6-203ENST00000469420 COBLL1Q53SF7 1204 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 ZSCAN29Q8IWY8 852 aaPredicted RBP18.96■□□□□ 0.63
CBX6-203ENST00000469420 NOA1Q8NC60 698 aaKnown RBP18.96■□□□□ 0.63
CBX6-203ENST00000469420 CDK5RAP3Q96JB5 506 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 NUDT12Q9BQG2 462 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 PSMD14O00487 310 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 SHMT1P34896 483 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 ZBED6P86452 979 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 NFIAQ12857 509 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 TRAPPC11Q7Z392 1133 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 KIAA1328Q86T90 577 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 ZFPM1Q8IX07 1006 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 NUP58Q9BVL2 599 aa18.96■□□□□ 0.63
CBX6-203ENST00000469420 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
CBX6-203ENST00000469420 RCCD1A6NED2 376 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 POTEB2H3BUK9 544 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 ATP1A1P05023 1023 aaKnown RBP18.95■□□□□ 0.62
CBX6-203ENST00000469420 CENPPQ6IPU0 288 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 TTBK2Q6IQ55 1244 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 UNC13DQ70J99 1090 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 KCNK18Q7Z418 384 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 RETREG2Q8NC44 543 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 SNX29Q8TEQ0 813 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 JAKMIP2Q96AA8 810 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 JMJD4Q9H9V9 463 aa18.95■□□□□ 0.62
CBX6-203ENST00000469420 ZCCHC17Q9NP64 241 aaKnown RBP18.95■□□□□ 0.62
CBX6-203ENST00000469420 ERICH4A6NGS2 130 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 TTLL1O95922 423 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 CYLC1P35663 651 aaPredicted RBP18.94■□□□□ 0.62
CBX6-203ENST00000469420 VSNL1P62760 191 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 ZNF543Q08ER8 600 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 BEND6Q5SZJ8 279 aaPredicted RBP18.94■□□□□ 0.62
CBX6-203ENST00000469420 CDC42EP5Q6NZY7 148 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 ERGIC2Q96RQ1 377 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 LACRTQ9GZZ8 138 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 USP40Q9NVE5 1235 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 ZNHIT6Q9NWK9 470 aaKnown RBP18.94■□□□□ 0.62
CBX6-203ENST00000469420 KRT83P78385 493 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 FKBP15Q5T1M5 1219 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
CBX6-203ENST00000469420 HNRNPLLQ8WVV9 542 aaKnown RBP18.94■□□□□ 0.62
CBX6-203ENST00000469420 RAD54LQ92698 747 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 GJA10Q969M2 543 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
CBX6-203ENST00000469420 MAP2K7O14733 419 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 IDEP14735 1019 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 SLC16A2P36021 539 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 GLIS3Q8NEA6 775 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 ZC3H12CQ9C0D7 883 aaKnown RBP18.93■□□□□ 0.62
CBX6-203ENST00000469420 SUGCTQ9HAC7 445 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 EPHB6O15197 1021 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 SRGAP2O75044 1071 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 CYP27A1Q02318 531 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 RAB34Q9BZG1 259 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 ABCB6Q9NP58 842 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 RIC8AQ9NPQ8 531 aa18.93■□□□□ 0.62
CBX6-203ENST00000469420 PNMA6FA0A0J9YX94 578 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 PVALEFA0A1B0GWK0 134 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 A0A1W2PQJ5 194 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 EIF3CLB5ME19 914 aaKnown RBP18.92■□□□□ 0.62
CBX6-203ENST00000469420 H3BQF6 201 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 PLEKP08567 350 aaPredicted RBP18.92■□□□□ 0.62
CBX6-203ENST00000469420 ATP2B2Q01814 1243 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 ECM1Q16610 540 aa18.92■□□□□ 0.62
CBX6-203ENST00000469420 CCDC96Q2M329 555 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms