RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 USP17L21D6R901 530 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 UPP2O95045 317 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 EYA4O95677 639 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 CXCL10P02778 98 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 HTRA4P83105 476 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 RSPO4Q2I0M5 234 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 SMRP1Q8NCR6 262 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 CHST13Q8NET6 341 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 NUP88Q99567 741 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 PCDHGC5Q9Y5F6 944 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-202ENST00000469027 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 SCN10AQ9Y5Y9 1956 aa12.78□□□□□ -0.36
TRAIP-202ENST00000469027 RBAK-RBAKDNI3L0D1 243 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-202ENST00000469027 ADAM15Q13444 863 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-202ENST00000469027 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 PPP2R3CQ969Q6 453 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 MSLNLQ96KJ4 702 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 C11orf84Q9BUA3 381 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-202ENST00000469027 LMAN2LQ9H0V9 348 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
TRAIP-202ENST00000469027 ATG2AQ2TAZ0 1938 aa12.77□□□□□ -0.37
TRAIP-202ENST00000469027 GRM6O15303 877 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 SP100P23497 879 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-202ENST00000469027 ZAP70P43403 619 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 CCDC158Q5M9N0 1113 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAIP-202ENST00000469027 PRPF38AQ8NAV1 312 aaKnown RBP12.76□□□□□ -0.37
TRAIP-202ENST00000469027 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 ACAD9Q9H845 621 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 RAD50Q92878 1312 aa12.76□□□□□ -0.37
TRAIP-202ENST00000469027 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
TRAIP-202ENST00000469027 CKBP12277 381 aa12.75□□□□□ -0.37
TRAIP-202ENST00000469027 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
TRAIP-202ENST00000469027 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
TRAIP-202ENST00000469027 SH2B1Q9NRF2 756 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-202ENST00000469027 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-202ENST00000469027 GPR179Q6PRD1 2367 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 LGR5O75473 907 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 CYP2D6P10635 497 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 COASYQ13057 564 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 ANGPT1Q15389 498 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 KIAA0319Q5VV43 1072 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 KREMEN2Q8NCW0 462 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 HAUS7Q99871 368 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
TRAIP-202ENST00000469027 CLEC1BQ9P126 229 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
TRAIP-202ENST00000469027 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 KPNA6O60684 536 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 IGSF3O75054 1194 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-202ENST00000469027 GDF6Q6KF10 455 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-202ENST00000469027 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 FIBCD1Q8N539 461 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 FLCNQ8NFG4 579 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 DHX38Q92620 1227 aaKnown RBP12.73□□□□□ -0.37
TRAIP-202ENST00000469027 CCDC17Q96LX7 622 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
TRAIP-202ENST00000469027 SEMA4AQ9H3S1 761 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 KANSL2Q9H9L4 492 aa12.73□□□□□ -0.37
TRAIP-202ENST00000469027 RB1P06400 928 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 ALDH1L2Q3SY69 923 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 UBALD2Q8IYN6 164 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 DBF4BQ8NFT6 615 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 MEIS3Q99687 375 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
TRAIP-202ENST00000469027 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
TRAIP-202ENST00000469027 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
TRAIP-202ENST00000469027 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 NRIP1P48552 1158 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 DMWDQ09019 674 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
TRAIP-202ENST00000469027 DCLK2Q8N568 766 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 EFHBQ8N7U6 833 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 RUBCNQ92622 972 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 SORCS3Q9UPU3 1222 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 RWDD3Q9Y3V2 267 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 R4GN57 208 aa12.71□□□□□ -0.37
TRAIP-202ENST00000469027 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
TRAIP-202ENST00000469027 BRD1O95696 1058 aa12.7□□□□□ -0.38
TRAIP-202ENST00000469027 MMP1P03956 469 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms