RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 AKAP17AQ02040 695 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 LRRC41Q15345 812 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 STXBP2Q15833 593 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 TAPT1Q6NXT6 567 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 CPLX2Q6PUV4 134 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 UPF2Q9HAU5 1272 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 Q9Y3F1 56 aa17.04■□□□□ 0.32
TMEM39A-205ENST00000468676 hCG_1642624A0A1W2PR95 340 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 RBM47A0AV96 593 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 EIF3JO75822 258 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 NR3C2P08235 984 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 COL6A1P12109 1028 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 IFNAR1P17181 557 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 EEPD1Q7L9B9 569 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 DIS3LQ8TF46 1054 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 TSEN34Q9BSV6 310 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 BARHL2Q9NY43 387 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 LRRC37A2A6NM11 1700 aa17.03■□□□□ 0.32
TMEM39A-205ENST00000468676 CPLX1O14810 134 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 PGK1P00558 417 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 SCG2P13521 617 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 ADCYAP1R1P41586 468 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 NEK4P51957 841 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 GJA9P57773 515 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 NKX3-2P78367 333 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 NTRK3Q16288 839 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 PFKFB3Q16875 520 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 GJC2Q5T442 439 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 WWC2Q6AWC2 1192 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 PDCD2LQ9BRP1 358 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
TMEM39A-205ENST00000468676 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 MEIS2O14770 477 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 ADAMTS4O75173 837 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 CST5P28325 142 aaPredicted RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 NAPAP54920 295 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 DUSP28Q4G0W2 176 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 TRIM22Q8IYM9 498 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 KLHDC9Q8NEP7 349 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.313e-8■■■■■ 71.9
TMEM39A-205ENST00000468676 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 PDGFCQ9NRA1 345 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 GNEQ9Y223 722 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 KIAA1217Q5T5P2 1943 aa17.01■□□□□ 0.31
TMEM39A-205ENST00000468676 FRMPD4Q14CM0 1322 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 MOXD2PA6NHM9 499 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 STXBP3O00186 592 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 ADCY6O43306 1168 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 STAM2O75886 525 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 CDKL5O76039 1030 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 C6orf222P0C671 652 aaPredicted RBP17■□□□□ 0.31
TMEM39A-205ENST00000468676 SMPD1P17405 629 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 CCND2P30279 289 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 RBM25P49756 843 aaKnown RBP17■□□□□ 0.31
TMEM39A-205ENST00000468676 AK2P54819 239 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
TMEM39A-205ENST00000468676 TTLL4Q14679 1199 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 PGM5Q15124 567 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 USP17L6PQ6QN14 398 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 TLK2Q86UE8 772 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 DPF3Q92784 378 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 LENG1Q96BZ8 264 aaPredicted RBP17■□□□□ 0.31
TMEM39A-205ENST00000468676 SENP6Q9GZR1 1112 aaPredicted RBP17■□□□□ 0.31
TMEM39A-205ENST00000468676 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 PHF24Q9UPV7 400 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 DNAH12Q6ZR08 3092 aa17■□□□□ 0.31
TMEM39A-205ENST00000468676 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 ZEB2O60315 1214 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 PFKFB2O60825 505 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 ADCY7P51828 1080 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 STK3Q13188 491 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 GNASQ5JWF2 1037 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
TMEM39A-205ENST00000468676 FAM177A1Q8N128 213 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms