RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 MCF2L2Q86YR7 1114 aa21.43■■□□□ 1.02
SMC4-209ENST00000468653 GRAMD1CQ8IYS0 662 aa21.43■■□□□ 1.02
SMC4-209ENST00000468653 WDR90Q96KV7 1748 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 AFMP43652 599 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 RRAGBQ5VZM2 374 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 CABP7Q86V35 215 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 IGSF22Q8N9C0 903 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 CNKSR2Q8WXI2 1034 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 PAGE5Q96GU1 130 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 MBOAT7Q96N66 472 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 NAT10Q9H0A0 1025 aaKnown RBP21.42■■□□□ 1.02
SMC4-209ENST00000468653 TTC12Q9H892 705 aaPredicted RBP21.42■■□□□ 1.02
SMC4-209ENST00000468653 DISC1Q9NRI5 854 aa21.42■■□□□ 1.02
SMC4-209ENST00000468653 PRR29P0C7W0 189 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 ZNF76P36508 570 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 PPATQ06203 517 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 PRR16Q569H4 304 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 LUZP1Q86V48 1076 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 ERO1BQ86YB8 467 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 CLEC4DQ8WXI8 215 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 SMARCE1Q969G3 411 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 CLMNQ96JQ2 1002 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 HOMER2Q9NSB8 354 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 LRWD1Q9UFC0 647 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 SMC2O95347 1197 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 CYP3A4P08684 503 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 PDIA5Q14554 519 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 ISM2Q6H9L7 571 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 SH3RF1Q7Z6J0 888 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 HAS1Q92839 578 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 OTUD5Q96G74 571 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 HOXC10Q9NYD6 342 aa21.41■■□□□ 1.02
SMC4-209ENST00000468653 NFIBO00712 420 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 CIITAP33076 1130 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 HSD17B4P51659 736 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 Q4G0T1 1027 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 WNK4Q96J92 1243 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 PCDHA12Q9UN75 941 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 OTOFQ9HC10 1997 aa21.4■■□□□ 1.02
SMC4-209ENST00000468653 PDXDC2PQ6P474 469 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 SLFN12Q8IYM2 578 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 CALML4Q96GE6 196 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 PLIN2Q99541 437 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 KCNMB3Q9NPA1 279 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 ADAMTS5Q9UNA0 930 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 PAPPA2Q9BXP8 1791 aa21.39■■□□□ 1.01
SMC4-209ENST00000468653 SPDYE5A6NIY4 337 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 POTEIP0CG38 1075 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 OAZ1P54368 228 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 CCDC173Q0VFZ6 552 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 MUM1L1Q5H9M0 696 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 NT5DC1Q5TFE4 455 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 MAP1SQ66K74 1059 aaPredicted RBP21.38■■□□□ 1.01
SMC4-209ENST00000468653 GADL1Q6ZQY3 521 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 TRERF1Q96PN7 1200 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 POTEMA6NI47 508 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 FAM86B1E9PN63 330 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 IRF6O14896 467 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 TBX3O15119 743 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 FAM86B2P0C5J1 330 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 SAMD3Q8N6K7 520 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 GJA10Q969M2 543 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 MAP3K20Q9NYL2 800 aaKnown RBP21.38■■□□□ 1.01
SMC4-209ENST00000468653 MAN1B1Q9UKM7 699 aa21.38■■□□□ 1.01
SMC4-209ENST00000468653 MYPNQ86TC9 1320 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 BECN2A8MW95 431 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 GOLGA6L19H0YKK7 550 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 CXCL11O14625 94 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 PLCG1P19174 1290 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 SARSP49591 514 aaKnown RBP21.37■■□□□ 1.01
SMC4-209ENST00000468653 PLCB2Q00722 1185 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 REPS2Q8NFH8 660 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 STAMQ92783 540 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 UIMC1Q96RL1 719 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 PARP14Q460N5 1801 aa21.37■■□□□ 1.01
SMC4-209ENST00000468653 UBXN2AP68543 259 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 GHRHRQ02643 423 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 DPYDQ12882 1025 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 IQCB1Q15051 598 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 TREML2Q5T2D2 321 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 KRT79Q5XKE5 535 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 SNRNP48Q6IEG0 339 aaKnown RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 SPATA20Q8TB22 786 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 CDK5RAP3Q96JB5 506 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 MMTAG2Q9BU76 263 aaKnown RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 CUEDC2Q9H467 287 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 ZNF408Q9H9D4 720 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 RNF146Q9NTX7 359 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 RABGAP1Q9Y3P9 1069 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 A0A0G2JLL6 359 aaPredicted RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 SPDYE16A6NNV3 312 aaPredicted RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 TRAF5O00463 557 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 GTPBP6O43824 516 aaPredicted RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 PPIL2Q13356 520 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 NAALADL2Q58DX5 795 aa21.36■■□□□ 1.01
SMC4-209ENST00000468653 PRRT2Q7Z6L0 340 aaPredicted RBP21.36■■□□□ 1.01
SMC4-209ENST00000468653 TRIML1Q8N9V2 468 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms