RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 SPRED1Q7Z699 444 aa5.99□□□□□ -1.45
SSB-208ENST00000468600 LINC00482Q8N8I6 264 aa5.99□□□□□ -1.45
SSB-208ENST00000468600 RNF34Q969K3 372 aa5.99□□□□□ -1.45
SSB-208ENST00000468600 FERD3LQ96RJ6 166 aa5.99□□□□□ -1.45
SSB-208ENST00000468600 ST6GALNAC2Q9UJ37 374 aa5.99□□□□□ -1.45
SSB-208ENST00000468600 ZNF214Q9UL59 606 aaPredicted RBP5.99□□□□□ -1.45
SSB-208ENST00000468600 TP53P04637 393 aaPredicted RBP5.98□□□□□ -1.45
SSB-208ENST00000468600 THBS2P35442 1172 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 COL9A2Q14055 689 aaPredicted RBP5.98□□□□□ -1.45
SSB-208ENST00000468600 TCEAL1Q15170 157 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 WWC2Q6AWC2 1192 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 UNC5AQ6ZN44 842 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 USP33Q8TEY7 942 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 CDK5RAP1Q96SZ6 601 aaKnown RBP5.98□□□□□ -1.45
SSB-208ENST00000468600 TSC22D4Q9Y3Q8 395 aa5.98□□□□□ -1.45
SSB-208ENST00000468600 FZD7O75084 574 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 SURF1Q15526 300 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 GORASP1Q9BQQ3 440 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 C11orf84Q9BUA3 381 aaPredicted RBP5.97□□□□□ -1.45
SSB-208ENST00000468600 PCED1AQ9H1Q7 454 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 FAM86C1Q9NVL1 165 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 DDX41Q9UJV9 622 aaKnown RBP5.97□□□□□ -1.45
SSB-208ENST00000468600 ZNF451Q9Y4E5 1061 aa5.97□□□□□ -1.45
SSB-208ENST00000468600 C8BP07358 591 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 SEPHS1P49903 392 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 PPP2R5DQ14738 602 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 CDSNQ15517 529 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 ZYXQ15942 572 aaKnown RBP5.96□□□□□ -1.46
SSB-208ENST00000468600 ZNF394Q53GI3 561 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 PLEKHH3Q7Z736 793 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 KYQ8NBH2 561 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 SPATA32Q96LK8 384 aa5.96□□□□□ -1.46
SSB-208ENST00000468600 DIS3Q9Y2L1 958 aaKnown RBP5.96□□□□□ -1.46
SSB-208ENST00000468600 STXBP3O00186 592 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 AURKAO14965 403 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 CBFA2T2O43439 604 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 LAMTOR5O43504 91 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 VAMP1P23763 118 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 RACK1P63244 317 aaKnown RBP5.95□□□□□ -1.46
SSB-208ENST00000468600 MCTP2Q6DN12 878 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 ETV3LQ6ZN32 361 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 LIMS2Q7Z4I7 341 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 ZC3H18Q86VM9 953 aaKnown RBP5.95□□□□□ -1.46
SSB-208ENST00000468600 DCP2Q8IU60 420 aaKnown RBP5.95□□□□□ -1.46
SSB-208ENST00000468600 TTLL6Q8N841 843 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 SSBP3Q9BWW4 388 aaPredicted RBP5.95□□□□□ -1.46
SSB-208ENST00000468600 VPS11Q9H270 941 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 GULP1Q9UBP9 304 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 FBLN5Q9UBX5 448 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 PPT2Q9UMR5 302 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 PCDHGB7Q9Y5F8 929 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 SLC12A7Q9Y666 1083 aa5.95□□□□□ -1.46
SSB-208ENST00000468600 TRBV23OR9-2A0A075B6M9 112 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 C9orf131Q5VYM1 1079 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 RUFY4Q6ZNE9 571 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 C19orf47Q8N9M1 422 aaKnown RBP5.94□□□□□ -1.46
SSB-208ENST00000468600 LCORQ96JN0 433 aaPredicted RBP5.94□□□□□ -1.46
SSB-208ENST00000468600 MTA3Q9BTC8 594 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 WDR26Q9H7D7 661 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.94□□□□□ -1.46
SSB-208ENST00000468600 WHRNQ9P202 907 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 BACE2Q9Y5Z0 518 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 LTBP3Q9NS15 1303 aa5.94□□□□□ -1.46
SSB-208ENST00000468600 NPHS1O60500 1241 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 SOX9P48436 509 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 TXNDC5Q8NBS9 432 aaKnown RBP5.93□□□□□ -1.46
SSB-208ENST00000468600 ADCY4Q8NFM4 1077 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 KLC2Q9H0B6 622 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 AP5M1Q9H0R1 490 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 GBP3Q9H0R5 595 aa5.93□□□□□ -1.46
SSB-208ENST00000468600 PHAXQ9H814 394 aaKnown RBP5.93□□□□□ -1.46
SSB-208ENST00000468600 C9orf118A6NHY6 69 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 PAMP19021 973 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 FBXW10Q5XX13 1052 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 CD300LDQ6UXZ3 194 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 CPNE8Q86YQ8 564 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 ZNF654Q8IZM8 581 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 OR6P1Q8NGX9 317 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 RASGRP4Q8TDF6 673 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 HAUS7Q99871 368 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 ZNF747Q9BV97 191 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 SIT1Q9Y3P8 196 aa5.92□□□□□ -1.46
SSB-208ENST00000468600 NPHP3-ACAD11A0A0J9YXS1 232 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 SCAMP3O14828 347 aaKnown RBP5.91□□□□□ -1.46
SSB-208ENST00000468600 NTRK1P04629 796 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 GIPRP48546 466 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 AMPD2Q01433 879 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 KLF10Q13118 480 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 ICAM4Q14773 271 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 DPY19L1Q2PZI1 675 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 CRBNQ96SW2 442 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 MCMBPQ9BTE3 642 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 KLHL25Q9H0H3 589 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 DEF6Q9H4E7 631 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 GINM1Q9NU53 330 aa5.91□□□□□ -1.46
SSB-208ENST00000468600 NPEPPSL1A6NEC2 478 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 C2orf71A6NGG8 1288 aa5.9□□□□□ -1.46
SSB-208ENST00000468600 DDX3XO00571 662 aaKnown RBP eCLIP5.9□□□□□ -1.46
SSB-208ENST00000468600 FUCA1P04066 466 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms