RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RMDN3Q96TC7 470 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 ZEB2O60315 1214 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 CFBP00751 764 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 CLTBP09497 229 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 HSD17B4P51659 736 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 SCFD2Q8WU76 684 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 IWS1Q96ST2 819 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 MYL10Q9BUA6 226 aa19.84■□□□□ 0.77
SSBP1-207ENST00000468267 MAP3K20Q9NYL2 800 aaKnown RBP19.84■□□□□ 0.77
SSBP1-207ENST00000468267 A0A0U1RQG5 324 aaPredicted RBP19.83■□□□□ 0.77
SSBP1-207ENST00000468267 CCDC69A6NI79 296 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 DCDC2CA8MYV0 355 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 ARVCFO00192 962 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 KIAA0355O15063 1070 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 CABYRO75952 493 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 KIF5BP33176 963 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 FAAP100Q0VG06 881 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 TSGA10IPQ3SY00 556 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 CXCL17Q6UXB2 119 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 NFXL1Q6ZNB6 911 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 SAMD3Q8N6K7 520 aa19.83■□□□□ 0.77
SSBP1-207ENST00000468267 CTCFLQ8NI51 663 aaPredicted RBP19.83■□□□□ 0.77
SSBP1-207ENST00000468267 MROH7Q68CQ1 1323 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 NKRFO15226 690 aaKnown RBP eCLIP19.82■□□□□ 0.76
SSBP1-207ENST00000468267 SMARCA1P28370 1054 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 BADQ92934 168 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 LZTS2Q9BRK4 669 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 SPZ1Q9BXG8 430 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 LRRC2Q9BYS8 371 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 TMEM39AQ9NV64 488 aa19.82■□□□□ 0.76
SSBP1-207ENST00000468267 SOX1O00570 391 aaPredicted RBP19.81■□□□□ 0.76
SSBP1-207ENST00000468267 CALM1P0DP23 149 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 CALM2P0DP24 149 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 CALM3P0DP25 149 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 GNAQP50148 359 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 STXBP2Q15833 593 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 ARHGEF16Q5VV41 709 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 RASEFQ8IZ41 740 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 NEK1Q96PY6 1258 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 PXMP2Q9NR77 195 aa19.81■□□□□ 0.76
SSBP1-207ENST00000468267 TXNP10599 105 aaKnown RBP19.8■□□□□ 0.76
SSBP1-207ENST00000468267 EIF2AK2P19525 551 aaKnown RBP19.8■□□□□ 0.76
SSBP1-207ENST00000468267 ITGB8P26012 769 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 CPT1AP50416 773 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 EXOSC10Q01780 885 aaKnown RBP19.8■□□□□ 0.76
SSBP1-207ENST00000468267 TTLL4Q14679 1199 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 LRIT3Q3SXY7 679 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 CCDC62Q6P9F0 684 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 SGMS1Q86VZ5 419 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 OR6J1Q8NGC5 347 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 PIBF1Q8WXW3 757 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 SLC12A7Q9Y666 1083 aa19.8■□□□□ 0.76
SSBP1-207ENST00000468267 GCOM1H8Y6P7 765 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 EIF3JO75822 258 aaKnown RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 ARIH2O95376 493 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 NR3C2P08235 984 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 POLR2MP0CAP2 368 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 RAG1P15918 1043 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 HOXA13P31271 388 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 ITGA7Q13683 1181 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 KRT32Q14532 448 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 SEPT14Q6ZU15 432 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 DHX32Q7L7V1 743 aaKnown RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 SRBD1Q8N5C6 995 aaKnown RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 COPS5Q92905 334 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 RRP36Q96EU6 259 aaKnown RBP19.79■□□□□ 0.76
SSBP1-207ENST00000468267 SEZ6LQ9BYH1 1024 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 POLR3EQ9NVU0 708 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 TBX21Q9UL17 535 aa19.79■□□□□ 0.76
SSBP1-207ENST00000468267 GRIN2DO15399 1336 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 MYH7BA7E2Y1 1941 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 PLEKHA8P1O95397 391 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 RXRAP19793 462 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 ADCK5Q3MIX3 580 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 FAM126BQ8IXS8 530 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 FANCBQ8NB91 859 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 KCNB2Q92953 911 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 LRCH3Q96II8 777 aa19.78■□□□□ 0.76
SSBP1-207ENST00000468267 SCN10AQ9Y5Y9 1956 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 A6NJR5 290 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 TLR3O15455 904 aaKnown RBP19.77■□□□□ 0.76
SSBP1-207ENST00000468267 TIMP1P01033 207 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 CD4P01730 458 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 KCNA4P22459 653 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 PSMC6P62333 389 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 PURAQ00577 322 aaKnown RBP19.77■□□□□ 0.76
SSBP1-207ENST00000468267 BRDTQ58F21 947 aaPredicted RBP19.77■□□□□ 0.76
SSBP1-207ENST00000468267 PDCD2LQ9BRP1 358 aa19.77■□□□□ 0.76
SSBP1-207ENST00000468267 KPNA6O60684 536 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 MYL3P08590 195 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 LY6KQ17RY6 165 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 ERICH6BQ5W0A0 696 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 SYNE3Q6ZMZ3 975 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 VSIG10LQ86VR7 867 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 RAB11FIP4Q86YS3 637 aa19.76■□□□□ 0.75
SSBP1-207ENST00000468267 CMTR1Q8N1G2 835 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms