RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 AMPD3Q01432 767 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 GBP6Q6ZN66 633 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 HEATR3Q7Z4Q2 680 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 RIN2Q8WYP3 895 aaPredicted RBP16.13■□□□□ 0.17
SEC16A-208ENST00000467838 MMTAG2Q9BU76 263 aaKnown RBP16.13■□□□□ 0.17
SEC16A-208ENST00000467838 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 USP17L8P0C7I0 530 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 FCER1AP12319 257 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 VWA3BQ502W6 1294 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 EMBQ6PCB8 327 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 OSBPL9Q96SU4 736 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 PLIN2Q99541 437 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
SEC16A-208ENST00000467838 TNRC6CQ9HCJ0 1690 aaKnown RBP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 GOLGA6CA6NDK9 693 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 GOLGA8KD6RF30 607 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 NKRFO15226 690 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 PLEKP08567 350 aaPredicted RBP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 GOLGA6DP0CG33 693 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 PPFIA1Q13136 1202 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 NNTQ13423 1086 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 NONOQ15233 471 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 MAN2A1Q16706 1144 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 ASTE1Q2TB18 679 aaPredicted RBP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 DNAJC21Q5F1R6 531 aaKnown RBP16.12■□□□□ 0.17
SEC16A-208ENST00000467838 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 EFCAB13Q8IY85 973 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 PPM1EQ8WY54 764 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 CAVIN3Q969G5 261 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 ALS2CR12Q96Q35 445 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 FAM107BQ9H098 131 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 GOLGA6AQ9NYA3 693 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
SEC16A-208ENST00000467838 PVALEFA0A1B0GWK0 134 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 EPHB6O15197 1021 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 EPHB4P54760 987 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 KCNQ4P56696 695 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 HAUS3Q68CZ6 603 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 SPTY2D1Q68D10 685 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 FBXO41Q8TF61 875 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 BAP1Q92560 729 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 PCMTD1Q96MG8 357 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 GRIN2DO15399 1336 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 MYH10P35580 1976 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 VGLL3A8MV65 326 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 RBAK-RBAKDNI3L0D1 243 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 GUF1Q8N442 669 aaKnown RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
SEC16A-208ENST00000467838 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 DMGDHQ9UI17 866 aaKnown RBP16.11■□□□□ 0.17
SEC16A-208ENST00000467838 ATAD5Q96QE3 1844 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 SSU72P8A0A1W2PR75 194 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 SMARCA1P28370 1054 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 EIF4A3P38919 411 aaKnown RBP16.1■□□□□ 0.17
SEC16A-208ENST00000467838 LRRC63Q05C16 580 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 EHHADHQ08426 723 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
SEC16A-208ENST00000467838 GLE1Q53GS7 698 aaKnown RBP16.1■□□□□ 0.17
SEC16A-208ENST00000467838 ALS2CLQ60I27 953 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 SND1Q7KZF4 910 aaKnown RBP eCLIP16.1■□□□□ 0.17
SEC16A-208ENST00000467838 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 HDAC7Q8WUI4 952 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 GDAP1L1Q96MZ0 367 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 LRRC1Q9BTT6 524 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 BLOC1S4Q9NUP1 217 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 STIM2Q9P246 746 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 TSKSQ9UJT2 592 aa16.1■□□□□ 0.17
SEC16A-208ENST00000467838 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 MOCS3O95396 460 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 FGFR1OPO95684 399 aaKnown RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 IRAK1P51617 712 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 RPS8P62241 208 aaKnown RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 SKOR1P84550 965 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 GRB10Q13322 594 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 RNF10Q8N5U6 811 aaKnown RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 OPA1O60313 960 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 GNA11P29992 359 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms