RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 KLRF2D3W0D1 207 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 ARVCFO00192 962 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 SOX1O00570 391 aaPredicted RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 CTAGE5O15320 804 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 TLR3O15455 904 aaKnown RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 DHX16O60231 1041 aaKnown RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 RAG1P15918 1043 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 SMPD1P17405 629 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 CALML3P27482 149 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 PTH1RQ03431 593 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 PDE4DQ08499 809 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 FSCN1Q16658 493 aaKnown RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 USH1GQ495M9 461 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 BRDTQ58F21 947 aaPredicted RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 FBXO11Q86XK2 927 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 BADQ92934 168 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 AMNQ9BXJ7 453 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
SSR3-205ENST00000467789 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
SSR3-205ENST00000467789 E7EWF7 191 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
SSR3-205ENST00000467789 DYNC1LI2O43237 492 aaPredicted RBP12.06□□□□□ -0.48
SSR3-205ENST00000467789 CPT1AP50416 773 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 QRICH1Q2TAL8 776 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 CYB5R4Q7L1T6 521 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 SLC43A3Q8NBI5 491 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 SCFD2Q8WU76 684 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 WDR11Q9BZH6 1224 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 JMJD4Q9H9V9 463 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
SSR3-205ENST00000467789 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
SSR3-205ENST00000467789 ZBTB5O15062 677 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 TIMP1P01033 207 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 BEX3Q00994 111 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 GHRHRQ02643 423 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 FPGSQ05932 587 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 WTAPQ15007 396 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 BMP2KLQ5H9B9 411 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 FAM109BQ6ICB4 259 aaPredicted RBP12.05□□□□□ -0.48
SSR3-205ENST00000467789 FAM126BQ8IXS8 530 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 TMTC2Q8N394 836 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 NSUN6Q8TEA1 469 aaKnown RBP12.05□□□□□ -0.48
SSR3-205ENST00000467789 MTMR8Q96EF0 704 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 PURBQ96QR8 312 aaKnown RBP12.05□□□□□ -0.48
SSR3-205ENST00000467789 MAP3K14Q99558 947 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
SSR3-205ENST00000467789 LAMA2P24043 3122 aaKnown RBP12.04□□□□□ -0.48
SSR3-205ENST00000467789 KPNA6O60684 536 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 FOXK1P85037 733 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 TROAPQ12815 778 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 TTLL4Q14679 1199 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 GRM4Q14833 912 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
SSR3-205ENST00000467789 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
SSR3-205ENST00000467789 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
SSR3-205ENST00000467789 KIAA1217Q5T5P2 1943 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 C2orf72A6NCS6 295 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 CD4P01730 458 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 TXNP10599 105 aaKnown RBP12.03□□□□□ -0.48
SSR3-205ENST00000467789 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 KIF5BP33176 963 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 HSD17B4P51659 736 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 MFSD10Q14728 455 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 SHHQ15465 462 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 STXBP2Q15833 593 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 MB21D2Q8IYB1 491 aaPredicted RBP12.03□□□□□ -0.48
SSR3-205ENST00000467789 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 DEFB123Q8N688 67 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
SSR3-205ENST00000467789 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 TMEM87BQ96K49 555 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 RMDN3Q96TC7 470 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 ESYT1Q9BSJ8 1104 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
SSR3-205ENST00000467789 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
SSR3-205ENST00000467789 A6NJR5 290 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms