RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	GOLGA6L19	H0YKK7	550 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	MARCH6	O60337	910 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	ZBED4	O75132	1171 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	FDX1	P10109	184 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	CYP3A7	P24462	503 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	IQCB1	Q15051	598 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	EAPP	Q56P03	285 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	NT5DC1	Q5TFE4	455 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	RRAGB	Q5VZM2	374 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	ISM2	Q6H9L7	571 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	DHX40	Q8IX18	779 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	AOPEP	Q8N6M6	819 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	TRIML1	Q8N9V2	468 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	PDLIM2	Q96JY6	352 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	BPIFA3	Q9BQP9	254 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	RAVER2	Q9HCJ3	691 aa	Known RBP	13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	PNMA2	Q9UL42	364 aa		13.88	□□□□□ -0.19
HDLBP-231	ENST00000467435	POTEM	A6NI47	508 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	BECN2	A8MW95	431 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	GTPBP6	O43824	516 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	ALAS1	P13196	640 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	SARS	P49591	514 aa	Known RBP	13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	PLCB2	Q00722	1185 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	DPYD	Q12882	1025 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435		Q4G0T1	1027 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	CPXCR1	Q8N123	301 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	TBC1D5	Q92609	795 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	HAS1	Q92839	578 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	ATG4C	Q96DT6	458 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	TTC12	Q9H892	705 aa	Predicted RBP	13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	MAGEF1	Q9HAY2	307 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	KCNMB3	Q9NPA1	279 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	LRWD1	Q9UFC0	647 aa		13.87	□□□□□ -0.19
HDLBP-231	ENST00000467435	NFIB	O00712	420 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CYP3A4	P08684	503 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	PLCG1	P19174	1290 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CASP1	P29466	404 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CIITA	P33076	1130 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	HSD17B4	P51659	736 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	MORC3	Q14149	939 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	TTLL12	Q14166	644 aa	Predicted RBP	13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	PRR16	Q569H4	304 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	NAALADL2	Q58DX5	795 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	SH3D19	Q5HYK7	790 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	MCF2L2	Q86YR7	1114 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	SLFN12	Q8IYM2	578 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	SPATA20	Q8TB22	786 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	RBM46	Q8TBY0	533 aa	Known RBP	13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CLEC4D	Q8WXI8	215 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	STAM	Q92783	540 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CALML4	Q96GE6	196 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	PLIN2	Q99541	437 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	MMTAG2	Q9BU76	263 aa	Known RBP	13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	CUEDC2	Q9H467	287 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	ELP3	Q9H9T3	547 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	DACH1	Q9UI36	760 aa		13.86	□□□□□ -0.19
HDLBP-231	ENST00000467435	FAM86B1	E9PN63	330 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	VWA5A	O00534	786 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	TBX3	O15119	743 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	ADCY5	O95622	1261 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	FAM86B2	P0C5J1	330 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	DSG3	P32926	999 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	ZNF76	P36508	570 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	GHRHR	Q02643	423 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	PDIA5	Q14554	519 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	KRT79	Q5XKE5	535 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	CATSPERG	Q6ZRH7	1159 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	PNMA8A	Q86V59	439 aa	Predicted RBP	13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	ANKRD13A	Q8IZ07	590 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	ETNPPL	Q8TBG4	499 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	SNX29	Q8TEQ0	813 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	GJA10	Q969M2	543 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	LENG9	Q96B70	501 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	WNK4	Q96J92	1243 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	CDK5RAP3	Q96JB5	506 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	MTR	Q99707	1265 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	BLZF1	Q9H2G9	400 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	HOMER2	Q9NSB8	354 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	LCT	P09848	1927 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	MYPN	Q86TC9	1320 aa		13.85	□□□□□ -0.19
HDLBP-231	ENST00000467435	POTEC	B2RU33	542 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	AP5Z1	O43299	807 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	BMP6	P22004	513 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	OAZ1	P54368	228 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	GRB10	Q13322	594 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	CUL4B	Q13620	913 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	COG2	Q14746	738 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	MUM1L1	Q5H9M0	696 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	MLKL	Q8NB16	471 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	REPS2	Q8NFH8	660 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	LRRC15	Q8TF66	581 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	CNKSR2	Q8WXI2	1034 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	TRIM44	Q96DX7	344 aa	Predicted RBP	13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	PNMA5	Q96PV4	448 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	GSDMA	Q96QA5	445 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	STK17A	Q9UEE5	414 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	PCDHA12	Q9UN75	941 aa		13.84	□□□□□ -0.19
HDLBP-231	ENST00000467435	RABGAP1	Q9Y3P9	1069 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms