RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 IFFO2Q5TF58 517 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 NSUN6Q8TEA1 469 aaKnown RBP12.73□□□□□ -0.37
MSH5-212ENST00000467319 TAAR1Q96RJ0 339 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
MSH5-212ENST00000467319 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
MSH5-212ENST00000467319 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 CPLX1O14810 134 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 CDKL5O76039 1030 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 AKR1A1P14550 325 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
MSH5-212ENST00000467319 RGS19P49795 217 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 NAPAP54920 295 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
MSH5-212ENST00000467319 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
MSH5-212ENST00000467319 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 LENG1Q96BZ8 264 aaPredicted RBP12.72□□□□□ -0.37
MSH5-212ENST00000467319 IWS1Q96ST2 819 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 PDCD2LQ9BRP1 358 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 RIC8AQ9NPQ8 531 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 ZHX1Q9UKY1 873 aaPredicted RBP12.72□□□□□ -0.37
MSH5-212ENST00000467319 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
MSH5-212ENST00000467319 RBM47A0AV96 593 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 DEXIO95424 95 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 UBE2SQ16763 222 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 FAM177A1Q8N128 213 aaPredicted RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 NSUN7Q8NE18 718 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 CUL5Q93034 780 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
MSH5-212ENST00000467319 ZMYND12Q9H0C1 365 aa12.71□□□□□ -0.37
MSH5-212ENST00000467319 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 CAPN15O75808 1086 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 CNGA1P29973 690 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 ADCY7P51828 1080 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 NKX3-2P78367 333 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
MSH5-212ENST00000467319 PDE4DQ08499 809 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 PGM5Q15124 567 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
MSH5-212ENST00000467319 SH3GLB2Q9NR46 395 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
MSH5-212ENST00000467319 FAM184BQ9ULE4 1060 aa12.7□□□□□ -0.38
MSH5-212ENST00000467319 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 B4DLN1 442 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 ADAMTS3O15072 1205 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 ST18O60284 1047 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 DUSP11O75319 330 aaKnown RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 RGS20O76081 388 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 NR3C2P08235 984 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 RARBP10826 455 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 COL6A1P12109 1028 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 FDPSP14324 419 aaKnown RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 NPY5RQ15761 445 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 PCNX4Q63HM2 1172 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 EEPD1Q7L9B9 569 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 FCHSD1Q86WN1 690 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 ZSCAN31Q96LW9 406 aaPredicted RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 GLT8D2Q9H1C3 349 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 PDGFCQ9NRA1 345 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 VPS54Q9P1Q0 977 aa12.69□□□□□ -0.38
MSH5-212ENST00000467319 GNEQ9Y223 722 aaKnown RBP12.69□□□□□ -0.38
MSH5-212ENST00000467319 SMCO2A6NFE2 343 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 DNM1LO00429 736 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 CTAGE5O15320 804 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 JAK2O60674 1132 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 SMPD1P17405 629 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 CCND2P30279 289 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
MSH5-212ENST00000467319 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 STXBP2Q15833 593 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 XRRA1Q6P2D8 792 aa12.68□□□□□ -0.38
MSH5-212ENST00000467319 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms