RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 ECM1Q16610 540 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 SNX29Q8TEQ0 813 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 CSRNP1Q96S65 589 aa12.81□□□□□ -0.36
HPS1-208ENST00000467246 SRCAPQ6ZRS2 3230 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 NDUFB10O96000 172 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 TUBB4AP04350 444 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 SYCP1Q15431 976 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 ANKRD40Q6AI12 368 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 LRRN4CLQ8ND94 238 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 LARP4BQ92615 738 aaKnown RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 DHTKD1Q96HY7 919 aaPredicted RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 MRPL44Q9H9J2 332 aaKnown RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 A0A0U1RQJ8 604 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 ENTPD3O75355 529 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 KRT79Q5XKE5 535 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 CNGA4Q8IV77 575 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 CSGALNACT2Q8N6G5 542 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 ATRIPQ8WXE1 791 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 P2RX5Q93086 422 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 CCDC47Q96A33 483 aaKnown RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
HPS1-208ENST00000467246 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 THAP9Q9H5L6 903 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.8□□□□□ -0.36
HPS1-208ENST00000467246 PHLPP2Q6ZVD8 1323 aa12.8□□□□□ -0.36
HPS1-208ENST00000467246 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 CLRN2A0PK11 232 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 TCP10L2B9ZVM9 353 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 MARCH6O60337 910 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 RAD17O75943 681 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 CCNE1P24864 410 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 WDR24Q96S15 920 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 STK17AQ9UEE5 414 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 MEIS2O14770 477 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 EEF1GP26641 437 aaKnown RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 IKQ13123 557 aaPredicted RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 RBM26Q5T8P6 1007 aaKnown RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 SPICE1Q8N0Z3 855 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 MB21D1Q8N884 522 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 SUPT20HQ8NEM7 779 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 RAD54LQ92698 747 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
HPS1-208ENST00000467246 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
HPS1-208ENST00000467246 MYH7BA7E2Y1 1941 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 LGALS16A8MUM7 142 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 NKRFO15226 690 aaKnown RBP eCLIP12.78□□□□□ -0.36
HPS1-208ENST00000467246 GNG11P61952 73 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 USH1GQ495M9 461 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 GMCL1P1Q8NEA9 526 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
HPS1-208ENST00000467246 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 TPM1P09493 284 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 CCDC175P0C221 793 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 ERVK-24P63145 666 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 TMEM119Q4V9L6 283 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 CNNM4Q6P4Q7 775 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 ANO3Q9BYT9 981 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 SEMA6BQ9H3T3 888 aa12.78□□□□□ -0.36
HPS1-208ENST00000467246 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
HPS1-208ENST00000467246 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
HPS1-208ENST00000467246 GOLGA6L9A6NEM1 432 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 B4DLN1 442 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 URI1O94763 535 aaPredicted RBP12.77□□□□□ -0.36
HPS1-208ENST00000467246 SPDYE6P0CI01 402 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 IDEP14735 1019 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 GCFC2P16383 781 aaKnown RBP12.77□□□□□ -0.36
HPS1-208ENST00000467246 KRT9P35527 623 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 UNC13DQ70J99 1090 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 DDX12PQ92771 950 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 CCDC51Q96ER9 411 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 GMCL1Q96IK5 515 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 TUBGCP2Q9BSJ2 902 aa12.77□□□□□ -0.36
HPS1-208ENST00000467246 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.36
HPS1-208ENST00000467246 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 PSMD14O00487 310 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 FECHP22830 423 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 ECE1P42892 770 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 ELF2Q15723 593 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 SYDE2Q5VT97 1194 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 RSBN1LQ6PCB5 846 aaPredicted RBP12.77□□□□□ -0.37
HPS1-208ENST00000467246 TTLL6Q8N841 843 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 AMNQ9BXJ7 453 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms