RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZFYVE21Q9BQ24 234 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS13A-209ENST00000467124 SEMA3GQ9NS98 782 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 DUSP13Q9UII6 198 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 FBXL7Q9UJT9 491 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 VAV3Q9UKW4 847 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 TCFL5Q9UL49 500 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 WASHC2CQ9Y4E1 1318 aa5.62□□□□□ -1.51
VPS13A-209ENST00000467124 NPHP3-ACAD11A0A0J9YXS1 232 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 RPL10P27635 214 aaKnown RBP5.61□□□□□ -1.51
VPS13A-209ENST00000467124 FLT3P36888 993 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 LTBRP36941 435 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 GPR85P60893 370 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 ITKQ08881 620 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 KCNAB2Q13303 367 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 NAT16Q8N8M0 369 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 KCNJ15Q99712 375 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 TRIM8Q9BZR9 551 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 TYW1Q9NV66 732 aaKnown RBP5.61□□□□□ -1.51
VPS13A-209ENST00000467124 SLC5A4Q9NY91 659 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 EID1Q9Y6B2 187 aa5.61□□□□□ -1.51
VPS13A-209ENST00000467124 KCNK3O14649 394 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 ALDH1L1O75891 902 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 PAMP19021 973 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 IL2P60568 153 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 MTMR1Q13613 665 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 LRRC41Q15345 812 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 IQCEQ6IPM2 695 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 OR2W6PQ8NHA6 318 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 PCDH19Q8TAB3 1148 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 TSR2Q969E8 191 aaKnown RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 IPPKQ9H8X2 491 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 ATP13A1Q9HD20 1204 aa5.6□□□□□ -1.51
VPS13A-209ENST00000467124 BSDC1Q9NW68 430 aaPredicted RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 THG1LQ9NWX6 298 aaKnown RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 ZC3H7BQ9UGR2 993 aaKnown RBP5.6□□□□□ -1.51
VPS13A-209ENST00000467124 ALG1L2C9J202 215 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 GPR39O43194 453 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 KRT37O76014 449 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 PRNPP04156 253 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 CKMP06732 381 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 PYGMP11217 842 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 BCL6P41182 706 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 SCNN1BP51168 640 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 TTF1Q15361 905 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 WAPLQ7Z5K2 1190 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 WDR75Q8IWA0 830 aaKnown RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 SYTL4Q96C24 671 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 FCRL2Q96LA5 508 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 PTCHD1Q96NR3 888 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 TTC1Q99614 292 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 ALG1Q9BT22 464 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 ASPSCR1Q9BZE9 553 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 GPR27Q9NS67 375 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 LMCD1Q9NZU5 365 aa5.59□□□□□ -1.51
VPS13A-209ENST00000467124 H2AFY2Q9P0M6 372 aaPredicted RBP5.59□□□□□ -1.51
VPS13A-209ENST00000467124 CCDC66A2RUB6 948 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 ARVCFO00192 962 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 CBX4O00257 560 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 FGF10O15520 208 aaPredicted RBP5.58□□□□□ -1.52
VPS13A-209ENST00000467124 SOD2P04179 222 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 CPEP16870 476 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 KRT15P19012 456 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 CD96P40200 585 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 ADCYAP1R1P41586 468 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 EGR3Q06889 387 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 PAK1Q13153 545 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 SART3Q15020 963 aaKnown RBP5.58□□□□□ -1.52
VPS13A-209ENST00000467124 DHCR24Q15392 516 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS13A-209ENST00000467124 CHTF18Q8WVB6 975 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 MMP19Q99542 508 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 YIPF4Q9BSR8 244 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 JAM3Q9BX67 310 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 CRTAC1Q9NQ79 661 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 GABBR1Q9UBS5 961 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 ZNF281Q9Y2X9 895 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 NPFFR2Q9Y5X5 522 aa5.58□□□□□ -1.52
VPS13A-209ENST00000467124 PHLDB1Q86UU1 1377 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TMEM82A0PJX8 343 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 B4E1Z4 1266 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TRAF5O00463 557 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 COBLO75128 1261 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TBC1D8O95759 1140 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TGFB1P01137 390 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 ESR1P03372 595 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 COL6A2P12110 1019 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TEKQ02763 1124 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 DUSP4Q13115 394 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 PRSS36Q5K4E3 855 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 ANGEL2Q5VTE6 544 aaKnown RBP5.57□□□□□ -1.52
VPS13A-209ENST00000467124 VSIG10LQ86VR7 867 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms