RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 DBR1Q9UK59 544 aaKnown RBP6.12□□□□□ -1.43
VPS13D-203ENST00000466732 PDPK1O15530 556 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 PRR5P85299 388 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 RBM10P98175 930 aaKnown RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 ZNF200P98182 395 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 MAP4K2Q12851 820 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 KCNAB2Q13303 367 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 SSPNQ14714 243 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 SF3A1Q15459 793 aaKnown RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 IGDCC3Q8IVU1 814 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 LRRC56Q8IYG6 542 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 PLEKHO2Q8TD55 490 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 KCTD13Q8WZ19 329 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 SIGLEC10Q96LC7 697 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 AARSD1Q9BTE6 412 aaKnown RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 CCDC113Q9H0I3 377 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 ARHGEF4Q9NR80 690 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 SIRPGQ9P1W8 387 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 CNOT6Q9ULM6 557 aaKnown RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 PCDHA5Q9Y5H7 936 aa6.11□□□□□ -1.43
VPS13D-203ENST00000466732 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-203ENST00000466732 IRS2Q9Y4H2 1338 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 CCDC85CA6NKD9 419 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 IRS4O14654 1257 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-203ENST00000466732 DLX3O60479 287 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 NTRK1P04629 796 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 LTBRP36941 435 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
VPS13D-203ENST00000466732 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 SPATC1Q76KD6 591 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 TEX2Q8IWB9 1127 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 LRRC47Q8N1G4 583 aaKnown RBP6.1□□□□□ -1.43
VPS13D-203ENST00000466732 RCBTB1Q8NDN9 531 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 ZSCAN18Q8TBC5 510 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-203ENST00000466732 ZNF669Q96BR6 464 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-203ENST00000466732 NUDT5Q9UKK9 219 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 PLA2G2DQ9UNK4 145 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 IRAK3Q9Y616 596 aa6.1□□□□□ -1.43
VPS13D-203ENST00000466732 C22orf46C9J442 243 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 PRODHO43272 600 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 MYO1BO43795 1136 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 NUAK1O60285 661 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 LCP1P13796 627 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 PI3P19957 117 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 FBLN1P23142 703 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 FPR2P25090 351 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 BCL6P41182 706 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 GTF2A2P52657 109 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 SERINC3Q13530 473 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 CIAPIN1Q6FI81 312 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 TMEFF1Q8IYR6 380 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 PEX11GQ96HA9 241 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 FBXL7Q9UJT9 491 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 NPFFR2Q9Y5X5 522 aa6.09□□□□□ -1.43
VPS13D-203ENST00000466732 BUB1BO60566 1050 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-203ENST00000466732 FGFR1P11362 822 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 MTERF2Q49AM1 385 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 ZNF385BQ569K4 471 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 CEP68Q76N32 757 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 NLRP10Q86W26 655 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 Q8N1Y9 231 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 PANK1Q8TE04 598 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 ALG3Q92685 438 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 OSBP2Q969R2 916 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 TSPAN17Q96FV3 270 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 SPATA9Q9BWV2 254 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 BCAS3Q9H6U6 928 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 EPB41L4AQ9HCS5 686 aaPredicted RBP6.08□□□□□ -1.44
VPS13D-203ENST00000466732 SIT1Q9Y3P8 196 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 X6R8D5 127 aa6.08□□□□□ -1.44
VPS13D-203ENST00000466732 TRAV20A0A0B4J274 112 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 RFXAPO00287 272 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 PABPC1P11940 636 aaKnown RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 PFKLP17858 780 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 RASA3Q14644 834 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 SLC9A5Q14940 896 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 YOD1Q5VVQ6 348 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 NSMFQ6X4W1 530 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 USP53Q70EK8 1073 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 DCP2Q8IU60 420 aaKnown RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 SREK1Q8WXA9 508 aaKnown RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
VPS13D-203ENST00000466732 PFDN2Q9UHV9 154 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 PCDHA2Q9Y5H9 948 aa6.07□□□□□ -1.44
VPS13D-203ENST00000466732 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
VPS13D-203ENST00000466732 ASGR2P07307 311 aa6.06□□□□□ -1.44
VPS13D-203ENST00000466732 ZSCAN22P10073 491 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-203ENST00000466732 ATF2P15336 505 aa6.06□□□□□ -1.44
VPS13D-203ENST00000466732 IGFBP6P24592 240 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-203ENST00000466732 SSRP1Q08945 709 aaKnown RBP6.06□□□□□ -1.44
VPS13D-203ENST00000466732 LSAMPQ13449 338 aa6.06□□□□□ -1.44
VPS13D-203ENST00000466732 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms