RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GOLGA6L19H0YKK7 550 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 POTEB2H3BUK9 544 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 CCP110O43303 1012 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 ADCY5O95622 1261 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 HMGCRP04035 888 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 HOXC6P09630 235 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 CDC25BP30305 580 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 GRK4P32298 578 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.58
PMF1-204ENST00000466489 STK3Q13188 491 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 RNF207Q6ZRF8 634 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 TEX2Q8IWB9 1127 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 SRBD1Q8N5C6 995 aaKnown RBP11.4□□□□□ -0.58
PMF1-204ENST00000466489 SAMD3Q8N6K7 520 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 MYRIPQ8NFW9 859 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 RNF26Q9BY78 433 aaPredicted RBP11.4□□□□□ -0.58
PMF1-204ENST00000466489 GLT8D2Q9H1C3 349 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 MAP3K20Q9NYL2 800 aaKnown RBP11.4□□□□□ -0.58
PMF1-204ENST00000466489 GABRQQ9UN88 632 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 DIS3Q9Y2L1 958 aaKnown RBP11.4□□□□□ -0.58
PMF1-204ENST00000466489 RIPK3Q9Y572 518 aa11.4□□□□□ -0.58
PMF1-204ENST00000466489 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 CYTH3O43739 400 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 PFKFB2O60825 505 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 IFNAR1P17181 557 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 XBP1P17861 261 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 OLFML2BQ68BL8 750 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 PPP1R18Q6NYC8 613 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 CCDC148Q8NFR7 591 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 WASF1Q92558 559 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 CCDC34Q96HJ3 373 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 A1CFQ9NQ94 594 aaKnown RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 GJD2Q9UKL4 321 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 TPCN1Q9ULQ1 816 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 HPS5Q9UPZ3 1129 aa11.39□□□□□ -0.59
PMF1-204ENST00000466489 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
PMF1-204ENST00000466489 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 PRPF3O43395 683 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 DEXIO95424 95 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 CFBP00751 764 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 CALML3P27482 149 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 CDC27P30260 824 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 NAPAP54920 295 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 GSDMDP57764 484 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 FAM193AP78312 1265 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 CCDC83Q8IWF9 413 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 USP6NLQ92738 828 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 GTF3C6Q969F1 213 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 CYP39A1Q9NYL5 469 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 HOOK1Q9UJC3 728 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 CNPY2Q9Y2B0 182 aa11.38□□□□□ -0.59
PMF1-204ENST00000466489 R3HCC1Q9Y3T6 440 aaKnown RBP11.38□□□□□ -0.59
PMF1-204ENST00000466489 MCM3APO60318 1980 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 UQCRHLA0A096LP55 91 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 ASB14A6NK59 587 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 GCOM1H8Y6P7 765 aaPredicted RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 NFIBO00712 420 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 FIBPO43427 364 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 PGK2P07205 417 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 UQCRHP07919 91 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 POLR2MP0CAP2 368 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 SCG2P13521 617 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 ELNP15502 786 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 PFKFB3Q16875 520 aaPredicted RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 RNF214Q8ND24 703 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 SMARCC2Q8TAQ2 1214 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 MAML3Q96JK9 1138 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
PMF1-204ENST00000466489 ANO10Q9NW15 660 aa11.37□□□□□ -0.59
PMF1-204ENST00000466489 SYNGAP1Q96PV0 1343 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 STK36Q9NRP7 1315 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 COBLO75128 1261 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 INHAP05111 366 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 GNA11P29992 359 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 ADCY7P51828 1080 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 CAP1Q01518 475 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 FUT2Q10981 343 aa11.36□□□□□ -0.59
PMF1-204ENST00000466489 SCRN1Q12765 414 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms