RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 PPM1EQ8WY54 764 aa24.15■■□□□ 1.46
COL6A1-203ENST00000466285 RNF41Q9H4P4 317 aaPredicted RBP24.15■■□□□ 1.46
COL6A1-203ENST00000466285 QRICH1Q2TAL8 776 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 DGKHQ86XP1 1220 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 TAAR1Q96RJ0 339 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 MTG1Q9BT17 334 aaPredicted RBP24.14■■□□□ 1.45
COL6A1-203ENST00000466285 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.45
COL6A1-203ENST00000466285 DIAPH3Q9NSV4 1193 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 POLR3EQ9NVU0 708 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 COL4A4P53420 1690 aaPredicted RBP24.14■■□□□ 1.45
COL6A1-203ENST00000466285 TRANK1O15050 2925 aa24.14■■□□□ 1.45
COL6A1-203ENST00000466285 LOC102724159A0A0B4J2E5 919 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 OPLAHO14841 1288 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 CPT1AP50416 773 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 PWP2Q15269 919 aaKnown RBP24.13■■□□□ 1.45
COL6A1-203ENST00000466285 SLC35G1Q2M3R5 365 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 FAM47CQ5HY64 1035 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 GPATCH4Q5T3I0 446 aaKnown RBP24.13■■□□□ 1.45
COL6A1-203ENST00000466285 DEFB128Q7Z7B8 93 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 SYTL5Q8TDW5 730 aaPredicted RBP24.13■■□□□ 1.45
COL6A1-203ENST00000466285 CTAGE1Q96RT6 745 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 ZSCAN10Q96SZ4 725 aaPredicted RBP24.13■■□□□ 1.45
COL6A1-203ENST00000466285 ZSWIM5Q9P217 1185 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 MYH7BA7E2Y1 1941 aa24.13■■□□□ 1.45
COL6A1-203ENST00000466285 ARHGEF15O94989 841 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 TXNP10599 105 aaKnown RBP24.12■■□□□ 1.45
COL6A1-203ENST00000466285 GSPT1P15170 499 aaKnown RBP24.12■■□□□ 1.45
COL6A1-203ENST00000466285 CCDC62Q6P9F0 684 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 STAG2Q8N3U4 1231 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 DNERQ8NFT8 737 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 SCFD2Q8WU76 684 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 ANKS1AQ92625 1134 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 TAF6LQ9Y6J9 622 aa24.12■■□□□ 1.45
COL6A1-203ENST00000466285 A6NJR5 290 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 PPP1R11O60927 126 aaPredicted RBP24.11■■□□□ 1.45
COL6A1-203ENST00000466285 ARHGAP1Q07960 439 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 LY6KQ17RY6 165 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 CYB5R4Q7L1T6 521 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 DSCC1Q9BVC3 393 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 KAT14Q9H8E8 782 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 JMJD4Q9H9V9 463 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 XIRP2A4UGR9 3374 aa24.11■■□□□ 1.45
COL6A1-203ENST00000466285 BAZ2BQ9UIF8 2168 aaKnown RBP24.1■■□□□ 1.45
COL6A1-203ENST00000466285 ZBBXA8MT70 800 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 MFAP1P55081 439 aaKnown RBP24.1■■□□□ 1.45
COL6A1-203ENST00000466285 SEPT14Q6ZU15 432 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 AFG1LQ8WV93 481 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 VAT1LQ9HCJ6 419 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 DOCK5Q9H7D0 1870 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 ABCB11O95342 1321 aa24.1■■□□□ 1.45
COL6A1-203ENST00000466285 CHMP4BP1P59074 171 aa24.09■■□□□ 1.45
COL6A1-203ENST00000466285 RAB30Q15771 203 aa24.09■■□□□ 1.45
COL6A1-203ENST00000466285 CCDC85BQ15834 202 aaPredicted RBP24.09■■□□□ 1.45
COL6A1-203ENST00000466285 SPRED2Q7Z698 418 aa24.09■■□□□ 1.45
COL6A1-203ENST00000466285 SENP2Q9HC62 589 aa24.09■■□□□ 1.45
COL6A1-203ENST00000466285 MSRAQ9UJ68 235 aa24.09■■□□□ 1.45
COL6A1-203ENST00000466285 MMP3P08254 477 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 EIF2AK2P19525 551 aaKnown RBP24.08■■□□□ 1.45
COL6A1-203ENST00000466285 SEC23AQ15436 765 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 ASPRV1Q53RT3 343 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 IQCA1Q86XH1 822 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 KAT2BQ92831 832 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 GAS2L1Q99501 681 aaPredicted RBP24.08■■□□□ 1.45
COL6A1-203ENST00000466285 SEZ6LQ9BYH1 1024 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 SLC4A7Q9Y6M7 1214 aa24.08■■□□□ 1.45
COL6A1-203ENST00000466285 NKRFO15226 690 aaKnown RBP eCLIP24.07■■□□□ 1.44
COL6A1-203ENST00000466285 CHST3Q7LGC8 479 aa24.07■■□□□ 1.44
COL6A1-203ENST00000466285 RGS22Q8NE09 1264 aa24.07■■□□□ 1.44
COL6A1-203ENST00000466285 DHX38Q92620 1227 aaKnown RBP24.07■■□□□ 1.44
COL6A1-203ENST00000466285 EPOPA6NHQ4 379 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 RFXAPO00287 272 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 DHX16O60231 1041 aaKnown RBP24.06■■□□□ 1.44
COL6A1-203ENST00000466285 PARP1P09874 1014 aaKnown RBP24.06■■□□□ 1.44
COL6A1-203ENST00000466285 GPNMBQ14956 572 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 IMMTQ16891 758 aaKnown RBP24.06■■□□□ 1.44
COL6A1-203ENST00000466285 TCTN1Q2MV58 587 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 GDF6Q6KF10 455 aaPredicted RBP24.06■■□□□ 1.44
COL6A1-203ENST00000466285 NFRKBQ6P4R8 1299 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 IL31RAQ8NI17 732 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 GPHNQ9NQX3 736 aaPredicted RBP24.06■■□□□ 1.44
COL6A1-203ENST00000466285 PNMA2Q9UL42 364 aa24.06■■□□□ 1.44
COL6A1-203ENST00000466285 PRRC2BQ5JSZ5 2229 aaKnown RBP24.05■■□□□ 1.44
COL6A1-203ENST00000466285 SORBS3O60504 671 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 IQCF3P0C7M6 154 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 ATP2A2P16615 1042 aaKnown RBP24.05■■□□□ 1.44
COL6A1-203ENST00000466285 IGFBP4P22692 258 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 AAMPQ13685 434 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 PPP2R2DQ66LE6 453 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 TMCO2Q7Z6W1 182 aaPredicted RBP24.05■■□□□ 1.44
COL6A1-203ENST00000466285 FBXO11Q86XK2 927 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 ZFP91Q96JP5 570 aaPredicted RBP24.05■■□□□ 1.44
COL6A1-203ENST00000466285 RMDN3Q96TC7 470 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 MTIF3Q9H2K0 278 aaKnown RBP24.05■■□□□ 1.44
COL6A1-203ENST00000466285 SLC28A3Q9HAS3 691 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 RAD50Q92878 1312 aa24.05■■□□□ 1.44
COL6A1-203ENST00000466285 CA3P07451 260 aa24.04■■□□□ 1.44
COL6A1-203ENST00000466285 SUPT20HL2P0C7V6 817 aa24.04■■□□□ 1.44
COL6A1-203ENST00000466285 PTH1RQ03431 593 aa24.04■■□□□ 1.44
COL6A1-203ENST00000466285 WNT8BQ93098 351 aa24.04■■□□□ 1.44
COL6A1-203ENST00000466285 CERS4Q9HA82 394 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms