RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 SEPT14Q6ZU15 432 aa18.03■□□□□ 0.48
SCAP-209ENST00000465628 TAAR1Q96RJ0 339 aa18.03■□□□□ 0.48
SCAP-209ENST00000465628 TMEM39AQ9NV64 488 aa18.03■□□□□ 0.48
SCAP-209ENST00000465628 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
SCAP-209ENST00000465628 NAP1L2Q9ULW6 460 aaPredicted RBP18.03■□□□□ 0.48
SCAP-209ENST00000465628 PNMA6FA0A0J9YX94 578 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
SCAP-209ENST00000465628 CABYRO75952 493 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 RAG1P15918 1043 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 EDNRBP24530 442 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 HOXA13P31271 388 aaPredicted RBP18.02■□□□□ 0.48
SCAP-209ENST00000465628 CPT1AP50416 773 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 TMEM63BQ5T3F8 832 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 CCSAPQ6IQ19 270 aaPredicted RBP18.02■□□□□ 0.48
SCAP-209ENST00000465628 MTMR8Q96EF0 704 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 MAF1Q9H063 256 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 RIOX1Q9H6W3 641 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 Q9Y3F1 56 aa18.02■□□□□ 0.48
SCAP-209ENST00000465628 NKRFO15226 690 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCAP-209ENST00000465628 TLR3O15455 904 aaKnown RBP18.01■□□□□ 0.47
SCAP-209ENST00000465628 CYTH3O43739 400 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 REC8O95072 547 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 MYL3P08590 195 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 TXNP10599 105 aaKnown RBP18.01■□□□□ 0.47
SCAP-209ENST00000465628 LIFRP42702 1097 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 STXBP2Q15833 593 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 SH3RF1Q7Z6J0 888 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 FCHSD1Q86WN1 690 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 BADQ92934 168 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 MAP3K14Q99558 947 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 SPZ1Q9BXG8 430 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 PXMP2Q9NR77 195 aa18.01■□□□□ 0.47
SCAP-209ENST00000465628 ARVCFO00192 962 aa18■□□□□ 0.47
SCAP-209ENST00000465628 CTAGE5O15320 804 aa18■□□□□ 0.47
SCAP-209ENST00000465628 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
SCAP-209ENST00000465628 MYCLP12524 364 aaPredicted RBP18■□□□□ 0.47
SCAP-209ENST00000465628 HSD17B4P51659 736 aa18■□□□□ 0.47
SCAP-209ENST00000465628 SLC35G1Q2M3R5 365 aa18■□□□□ 0.47
SCAP-209ENST00000465628 ANKRD33Q7Z3H0 272 aa18■□□□□ 0.47
SCAP-209ENST00000465628 CUL5Q93034 780 aa18■□□□□ 0.47
SCAP-209ENST00000465628 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
SCAP-209ENST00000465628 TRIM43BA6NCK2 446 aa17.99■□□□□ 0.47
SCAP-209ENST00000465628 CHMP4BP1P59074 171 aa17.99■□□□□ 0.47
SCAP-209ENST00000465628 COL9A3Q14050 684 aaPredicted RBP17.99■□□□□ 0.47
SCAP-209ENST00000465628 DHX32Q7L7V1 743 aaKnown RBP17.99■□□□□ 0.47
SCAP-209ENST00000465628 CMTR1Q8N1G2 835 aaKnown RBP17.99■□□□□ 0.47
SCAP-209ENST00000465628 TRIM43Q96BQ3 446 aaPredicted RBP17.99■□□□□ 0.47
SCAP-209ENST00000465628 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
SCAP-209ENST00000465628 MRVI1Q9Y6F6 885 aa17.99■□□□□ 0.47
SCAP-209ENST00000465628 KIAA1217Q5T5P2 1943 aa17.99■□□□□ 0.47
SCAP-209ENST00000465628 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
SCAP-209ENST00000465628 OPLAHO14841 1288 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 NR3C2P08235 984 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 HMGB1P09429 215 aaKnown RBP17.98■□□□□ 0.47
SCAP-209ENST00000465628 PSMC6P62333 389 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 NKX3-2P78367 333 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 ITGA7Q13683 1181 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 COPS5Q92905 334 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 JAKMIP1Q96N16 626 aaKnown RBP17.98■□□□□ 0.47
SCAP-209ENST00000465628 TOX2Q96NM4 488 aa17.98■□□□□ 0.47
SCAP-209ENST00000465628 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
SCAP-209ENST00000465628 KIAA0355O15063 1070 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 ZBTB43O43298 467 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 ARIH2O95376 493 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 CCND2P30279 289 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 FAAP100Q0VG06 881 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 RTN1Q16799 776 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 FAM47CQ5HY64 1035 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 LRCH3Q96II8 777 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 PDCD2LQ9BRP1 358 aa17.97■□□□□ 0.47
SCAP-209ENST00000465628 MTG1Q9BT17 334 aaPredicted RBP17.97■□□□□ 0.47
SCAP-209ENST00000465628 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
SCAP-209ENST00000465628 KLF18A0A0U1RQI7 1052 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 GOLGA8AA7E2F4 631 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 SOX1O00570 391 aaPredicted RBP17.96■□□□□ 0.47
SCAP-209ENST00000465628 EIF3JO75822 258 aaKnown RBP17.96■□□□□ 0.47
SCAP-209ENST00000465628 GH1P01241 217 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 FPGSQ05932 587 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 LY6KQ17RY6 165 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 APOA5Q6Q788 366 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 BLOC1S2Q6QNY1 142 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 TMTC3Q6ZXV5 915 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 HEATR3Q7Z4Q2 680 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 SRBD1Q8N5C6 995 aaKnown RBP17.96■□□□□ 0.47
SCAP-209ENST00000465628 FANCBQ8NB91 859 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 PPP1R12CQ9BZL4 782 aa17.96■□□□□ 0.47
SCAP-209ENST00000465628 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
SCAP-209ENST00000465628 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms