RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 MCM7P33993 719 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 SP3Q02447 781 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 GHRHRQ02643 423 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 SF3A1Q15459 793 aaKnown RBP19.62■□□□□ 0.73
PTPRU-206ENST00000465525 ANO1Q5XXA6 986 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 NEK8Q86SG6 692 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 MAF1Q9H063 256 aa19.62■□□□□ 0.73
PTPRU-206ENST00000465525 ZSWIM8A7E2V4 1837 aa19.61■□□□□ 0.73
PTPRU-206ENST00000465525 GPR25O00155 361 aa19.61■□□□□ 0.73
PTPRU-206ENST00000465525 FOSP01100 380 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-206ENST00000465525 CNTN2Q02246 1040 aa19.61■□□□□ 0.73
PTPRU-206ENST00000465525 CLEC17AQ6ZS10 378 aa19.61■□□□□ 0.73
PTPRU-206ENST00000465525 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
PTPRU-206ENST00000465525 DDX49Q9Y6V7 483 aaKnown RBP19.61■□□□□ 0.73
PTPRU-206ENST00000465525 TDP2O95551 362 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 PGK2P07205 417 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 EIF2AK2P19525 551 aaKnown RBP19.6■□□□□ 0.73
PTPRU-206ENST00000465525 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 TEX2Q8IWB9 1127 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 SAMD3Q8N6K7 520 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 IL31RAQ8NI17 732 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 MMP19Q99542 508 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 RTEL1Q9NZ71 1219 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 CFAP45Q9UL16 551 aa19.6■□□□□ 0.73
PTPRU-206ENST00000465525 STRNO43815 780 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 CCNT1O60563 726 aaKnown RBP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 SREBF1P36956 1147 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 MCTP2Q6DN12 878 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 LEO1Q8WVC0 666 aaPredicted RBP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 SPATA32Q96LK8 384 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 MAP3K20Q9NYL2 800 aaKnown RBP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 PLXNA1Q9UIW2 1896 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 MGAMO43451 1857 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 PFASO15067 1338 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 FCER1AP12319 257 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 TRAPPC10P48553 1259 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 LACTBP83111 547 aaPredicted RBP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 KCTD2Q14681 263 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 KIF22Q14807 665 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 STK38Q15208 465 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 UIMC1Q96RL1 719 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 RMDN3Q96TC7 470 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.59■□□□□ 0.73
PTPRU-206ENST00000465525 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 IVNS1ABPQ9Y6Y0 642 aa19.59■□□□□ 0.73
PTPRU-206ENST00000465525 DOCK3Q8IZD9 2030 aa19.58■□□□□ 0.73
PTPRU-206ENST00000465525 RPTORQ8N122 1335 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 MARCKSP29966 332 aaPredicted RBP19.58■□□□□ 0.72
PTPRU-206ENST00000465525 NASPP49321 788 aaPredicted RBP19.58■□□□□ 0.72
PTPRU-206ENST00000465525 PTPAQ15257 358 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 ARHGEF16Q5VV41 709 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 GPR142Q7Z601 462 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 PLEKHH3Q7Z736 793 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 ABRAQ8N0Z2 381 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 CRYGNQ8WXF5 182 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 PXMP2Q9NR77 195 aa19.58■□□□□ 0.72
PTPRU-206ENST00000465525 ASTN1O14525 1302 aa19.57■□□□□ 0.72
PTPRU-206ENST00000465525 POTEB2H3BUK9 544 aa19.57■□□□□ 0.72
PTPRU-206ENST00000465525 ATL3Q6DD88 541 aa19.57■□□□□ 0.72
PTPRU-206ENST00000465525 LINC00301Q8NCQ3 95 aa19.57■□□□□ 0.72
PTPRU-206ENST00000465525 EHMT1Q9H9B1 1298 aa19.57■□□□□ 0.72
PTPRU-206ENST00000465525 MCM3APO60318 1980 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 SLC37A4O43826 429 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 FKTNO75072 461 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
PTPRU-206ENST00000465525 MYCLP12524 364 aaPredicted RBP19.56■□□□□ 0.72
PTPRU-206ENST00000465525 PTPREP23469 700 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 MCM4P33991 863 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 PSMC4P43686 418 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 FCGRTP55899 365 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 PTGDRQ13258 359 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 PGM5Q15124 567 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 SCAND2PQ9GZW5 306 aaPredicted RBP19.56■□□□□ 0.72
PTPRU-206ENST00000465525 TMEM60Q9H2L4 133 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 SOWAHBA6NEL2 793 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 TNPO2O14787 897 aaKnown RBP19.56■□□□□ 0.72
PTPRU-206ENST00000465525 ZNF76P36508 570 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 CYP2W1Q8TAV3 490 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 ZNF296Q8WUU4 475 aaPredicted RBP19.56■□□□□ 0.72
PTPRU-206ENST00000465525 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
PTPRU-206ENST00000465525 FRMPD4Q14CM0 1322 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 SLC15A5A6NIM6 579 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 FAM86B1E9PN63 330 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 SPTLC2O15270 562 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 YEATS4O95619 227 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 FAM86B2P0C5J1 330 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 ADORA2AP29274 412 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 USP11P51784 963 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 NFKBIBQ15653 356 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 FAM133AQ8N9E0 248 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 ERO1AQ96HE7 468 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 PDCD2LQ9BRP1 358 aa19.55■□□□□ 0.72
PTPRU-206ENST00000465525 DDX25Q9UHL0 483 aaKnown RBP19.55■□□□□ 0.72
PTPRU-206ENST00000465525 DNAJC25-GNG10A0A024R161 153 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 LRRC37A2A6NM11 1700 aa19.54■□□□□ 0.72
PTPRU-206ENST00000465525 GADD45BO75293 160 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms