RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 MRPL38Q96DV4 380 aaKnown RBP17.84■□□□□ 0.45
HDAC6-214ENST00000465269 SELPP16109 830 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 MCCP23508 829 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 TCF15Q12870 199 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 PUS10Q3MIT2 529 aaKnown RBP17.83■□□□□ 0.44
HDAC6-214ENST00000465269 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 CLDND1Q9NY35 253 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 MTMR7Q9Y216 660 aa17.83■□□□□ 0.44
HDAC6-214ENST00000465269 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 NFIBO00712 420 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 TTLL1O95922 423 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
HDAC6-214ENST00000465269 DLX2Q07687 328 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-214ENST00000465269 TKFCQ3LXA3 575 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 ZKSCAN2Q63HK3 967 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 BANK1Q8NDB2 785 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 AFAP1L1Q8TED9 768 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 WNT8BQ93098 351 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
HDAC6-214ENST00000465269 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-214ENST00000465269 CCPG1Q9ULG6 757 aa17.82■□□□□ 0.44
HDAC6-214ENST00000465269 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
HDAC6-214ENST00000465269 GFRA3O60609 400 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 ARIH2O95376 493 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 CXCL10P02778 98 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 LTBRP36941 435 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 MBTPS1Q14703 1052 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 LRRFIP1Q32MZ4 808 aaKnown RBP17.81■□□□□ 0.44
HDAC6-214ENST00000465269 EPC2Q52LR7 807 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 SBK1Q52WX2 424 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 SLC30A10Q6XR72 485 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 RNF135Q8IUD6 432 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 RPAP2Q8IXW5 612 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-214ENST00000465269 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
HDAC6-214ENST00000465269 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.81■□□□□ 0.442e-8■■■■□ 25.3
HDAC6-214ENST00000465269 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
HDAC6-214ENST00000465269 MYH7P12883 1935 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 A6NJR5 290 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 CSPG5O95196 566 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 CKBP12277 381 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 PTPN5P54829 565 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 PPP2R5BQ15173 497 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-214ENST00000465269 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 PRKAG3Q9UGI9 489 aa17.8■□□□□ 0.44
HDAC6-214ENST00000465269 ABHD14A-ACY1A0A1B0GW23 586 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 FDX1P10109 184 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 CALML3P27482 149 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 SLC1A4P43007 532 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 PTPN11Q06124 597 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-214ENST00000465269 GPM6BQ13491 265 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 HERC4Q5GLZ8 1057 aaPredicted RBP17.79■□□□□ 0.44
HDAC6-214ENST00000465269 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 RPAINQ86UA6 219 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 FAM160B2Q86V87 743 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 MYOCDQ8IZQ8 938 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
HDAC6-214ENST00000465269 CCDC155Q8N6L0 562 aa17.79■□□□□ 0.44
HDAC6-214ENST00000465269 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
HDAC6-214ENST00000465269 AFG1LQ8WV93 481 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 KAT2BQ92831 832 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 PBXIP1Q96AQ6 731 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 HAUS7Q99871 368 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
HDAC6-214ENST00000465269 ALG13Q9NP73 1137 aaKnown RBP17.78■□□□□ 0.44
HDAC6-214ENST00000465269 INSL6Q9Y581 213 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 ATG2AQ2TAZ0 1938 aa17.78■□□□□ 0.44
HDAC6-214ENST00000465269 TMEM221A6NGB7 291 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 M0R296 226 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 TXNP10599 105 aaKnown RBP17.77■□□□□ 0.44
HDAC6-214ENST00000465269 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.443e-6■■■■□ 25.9
HDAC6-214ENST00000465269 SLC16A2P36021 539 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 ZNF200P98182 395 aaPredicted RBP17.77■□□□□ 0.44
HDAC6-214ENST00000465269 IKBKEQ14164 716 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 COL19A1Q14993 1142 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 PTPROQ16827 1216 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 TTBK2Q6IQ55 1244 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 CHST3Q7LGC8 479 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
HDAC6-214ENST00000465269 EDAQ92838 391 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 ADD3Q9UEY8 706 aaKnown RBP17.77■□□□□ 0.44
HDAC6-214ENST00000465269 FAM50BQ9Y247 325 aa17.77■□□□□ 0.44
HDAC6-214ENST00000465269 RAD50Q92878 1312 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 MICAL3Q7RTP6 2002 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 H3BNC9 293 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 NMT2O60551 498 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 TSPY3P0CV98 308 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 TSPY8P0CW00 308 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 ATP5JP18859 108 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 TFAP4Q01664 338 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 PDE4BQ07343 736 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 PDE4DQ08499 809 aa17.76■□□□□ 0.43
HDAC6-214ENST00000465269 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms