RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	SAFB	Q15424	915 aa	Known RBP eCLIP	28	■■■□□ 2.07
RERE-208	ENST00000465125	NPY5R	Q15761	445 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	ARHGEF16	Q5VV41	709 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	JAKMIP3	Q5VZ66	844 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	LARP1B	Q659C4	914 aa	Known RBP	28	■■■□□ 2.07
RERE-208	ENST00000465125	TRMT44	Q8IYL2	757 aa	Known RBP	28	■■■□□ 2.07
RERE-208	ENST00000465125	NSUN6	Q8TEA1	469 aa	Known RBP	28	■■■□□ 2.07
RERE-208	ENST00000465125	MPHOSPH6	Q99547	160 aa	Known RBP	28	■■■□□ 2.07
RERE-208	ENST00000465125	EHMT1	Q9H9B1	1298 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	TMEM260	Q9NX78	707 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	PTPN22	Q9Y2R2	807 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125	PTCH2	Q9Y6C5	1203 aa		28	■■■□□ 2.07
RERE-208	ENST00000465125		H3BQV1	296 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	ADAMTS3	O15072	1205 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	IFFO2	Q5TF58	517 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	OLFML2B	Q68BL8	750 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	RASGRP4	Q8TDF6	673 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	PXMP2	Q9NR77	195 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	PCDHA6	Q9UN73	950 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	PCDHA8	Q9Y5H6	950 aa		27.99	■■■□□ 2.07
RERE-208	ENST00000465125	ASTN1	O14525	1302 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125	ASB14	A6NK59	587 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125		B4DLN1	442 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125	ADCY3	O60266	1144 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125	EIF2AK2	P19525	551 aa	Known RBP	27.98	■■■□□ 2.07
RERE-208	ENST00000465125	CCL14	Q16627	93 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125	DIS3L2	Q8IYB7	885 aa	Known RBP	27.98	■■■□□ 2.07
RERE-208	ENST00000465125	ANO3	Q9BYT9	981 aa		27.98	■■■□□ 2.07
RERE-208	ENST00000465125	LOC102724159	A0A0B4J2E5	919 aa		27.97	■■■□□ 2.07
RERE-208	ENST00000465125	PWP2	Q15269	919 aa	Known RBP	27.97	■■■□□ 2.07
RERE-208	ENST00000465125	MSL3	Q8N5Y2	521 aa	Known RBP	27.97	■■■□□ 2.07
RERE-208	ENST00000465125	SLAIN1	Q8ND83	568 aa		27.97	■■■□□ 2.07
RERE-208	ENST00000465125	PGBD1	Q96JS3	809 aa		27.97	■■■□□ 2.07
RERE-208	ENST00000465125	FLRT1	Q9NZU1	646 aa		27.97	■■■□□ 2.07
RERE-208	ENST00000465125	DAXX	Q9UER7	740 aa	Predicted RBP	27.97	■■■□□ 2.07
RERE-208	ENST00000465125	FRMPD4	Q14CM0	1322 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	RPTOR	Q8N122	1335 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	ELN	P15502	786 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	PKN2	Q16513	984 aa	Known RBP	27.96	■■■□□ 2.07
RERE-208	ENST00000465125	OXER1	Q8TDS5	423 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	PXYLP1	Q8TE99	480 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	TRIB2	Q92519	343 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	IWS1	Q96ST2	819 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	TINF2	Q9BSI4	451 aa		27.96	■■■□□ 2.07
RERE-208	ENST00000465125	SYNGAP1	Q96PV0	1343 aa		27.95	■■■□□ 2.07
RERE-208	ENST00000465125		M0R2N6	131 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	UBXN2A	P68543	259 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	PDE4D	Q08499	809 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	GNL2	Q13823	731 aa	Known RBP	27.95	■■■□□ 2.06
RERE-208	ENST00000465125	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.95	■■■□□ 2.06
RERE-208	ENST00000465125	MAMDC4	Q6UXC1	1216 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	ARMCX2	Q7L311	632 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	KRT25	Q7Z3Z0	450 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	PDCD2L	Q9BRP1	358 aa		27.95	■■■□□ 2.06
RERE-208	ENST00000465125	CCDC194	A0A1B0GVG4	234 aa		27.94	■■■□□ 2.06
RERE-208	ENST00000465125	GRK4	P32298	578 aa		27.94	■■■□□ 2.06
RERE-208	ENST00000465125	PGM5	Q15124	567 aa		27.94	■■■□□ 2.06
RERE-208	ENST00000465125	MFSD14C	Q5VZR4	134 aa		27.94	■■■□□ 2.06
RERE-208	ENST00000465125	VPS37C	A5D8V6	355 aa	Predicted RBP	27.93	■■■□□ 2.06
RERE-208	ENST00000465125	BTBD18	B2RXH4	712 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	HMGCR	P04035	888 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	SYT1	P21579	422 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	EDNRB	P24530	442 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	CCND2	P30279	289 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	NR5A1	Q13285	461 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	MORC4	Q8TE76	937 aa		27.93	■■■□□ 2.06
RERE-208	ENST00000465125	DDX49	Q9Y6V7	483 aa	Known RBP	27.93	■■■□□ 2.06
RERE-208	ENST00000465125	LRRC37A2	A6NM11	1700 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	NR3C2	P08235	984 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	MYCL	P12524	364 aa	Predicted RBP	27.92	■■■□□ 2.06
RERE-208	ENST00000465125	CYP2C19	P33261	490 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	SREBF1	P36956	1147 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	NONO	Q15233	471 aa	Known RBP eCLIP	27.92	■■■□□ 2.06
RERE-208	ENST00000465125	MCTP1	Q6DN14	999 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	IL31RA	Q8NI17	732 aa		27.92	■■■□□ 2.06
RERE-208	ENST00000465125	FOXP1	Q9H334	677 aa	Predicted RBP	27.92	■■■□□ 2.06
RERE-208	ENST00000465125	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.92	■■■□□ 2.06
RERE-208	ENST00000465125	TNFRSF25	Q93038	417 aa		27.91	■■■□□ 2.06
RERE-208	ENST00000465125	CNPY2	Q9Y2B0	182 aa		27.91	■■■□□ 2.06
RERE-208	ENST00000465125	MCM3AP	O60318	1980 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	IGHA2	P01877	340 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	ARHGAP4	P98171	946 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	STXBP2	Q15833	593 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	SLC9C1	Q4G0N8	1177 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	PCNX4	Q63HM2	1172 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	XRRA1	Q6P2D8	792 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	PIK3AP1	Q6ZUJ8	805 aa		27.9	■■■□□ 2.06
RERE-208	ENST00000465125	STX6	O43752	255 aa		27.89	■■■□□ 2.06
RERE-208	ENST00000465125	SNAI1	O95863	264 aa	Predicted RBP	27.89	■■■□□ 2.06
RERE-208	ENST00000465125	VSIG10L	Q86VR7	867 aa		27.89	■■■□□ 2.06
RERE-208	ENST00000465125	TBCK	Q8TEA7	893 aa		27.89	■■■□□ 2.06
RERE-208	ENST00000465125	INHA	P05111	366 aa		27.88	■■■□□ 2.05
RERE-208	ENST00000465125	NOSTRIN	Q8IVI9	506 aa		27.88	■■■□□ 2.05
RERE-208	ENST00000465125	SH3TC2	Q8TF17	1288 aa		27.88	■■■□□ 2.05
RERE-208	ENST00000465125	ABHD16B	Q9H3Z7	469 aa		27.88	■■■□□ 2.05
RERE-208	ENST00000465125	VTA1	Q9NP79	307 aa		27.88	■■■□□ 2.05
RERE-208	ENST00000465125	KIF28P	B7ZC32	967 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	EIF3J	O75822	258 aa	Known RBP	27.87	■■■□□ 2.05
RERE-208	ENST00000465125	STAM2	O75886	525 aa		27.87	■■■□□ 2.05
RERE-208	ENST00000465125	PDIA4	P13667	645 aa	Known RBP	27.87	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms