RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
CMTM1-207ENST00000465057 PPP2R3BQ9Y5P8 575 aa6.78□□□□□ -1.32
CMTM1-207ENST00000465057 MGAMO43451 1857 aa6.78□□□□□ -1.32
CMTM1-207ENST00000465057 PTPRFP10586 1907 aa6.78□□□□□ -1.32
CMTM1-207ENST00000465057 KIF16BQ96L93 1317 aa6.77□□□□□ -1.32
CMTM1-207ENST00000465057 MANSC4A6NHS7 340 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 FKTNO75072 461 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 ZBTB48P10074 688 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 CRKP46108 304 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 IREB2P48200 963 aaKnown RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 ATP11AP98196 1134 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 RSPO4Q2I0M5 234 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 NKAPLQ5M9Q1 402 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 CEP135Q66GS9 1140 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 TMED8Q6PL24 325 aaPredicted RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 FBXO33Q7Z6M2 555 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 CEP120Q8N960 986 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 TTC16Q8NEE8 873 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 TEPSINQ96N21 525 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 SALL4Q9UJQ4 1053 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 POLIQ9UNA4 740 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 SUGT1Q9Y2Z0 365 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 ATAD5Q96QE3 1844 aa6.77□□□□□ -1.33
CMTM1-207ENST00000465057 MYO5AQ9Y4I1 1855 aaKnown RBP6.77□□□□□ -1.33
CMTM1-207ENST00000465057 PHIPQ8WWQ0 1821 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 A6NHS1 94 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 DLL1O00548 723 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
CMTM1-207ENST00000465057 PDE8BO95263 885 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
CMTM1-207ENST00000465057 CAP1Q01518 475 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 SLFN5Q08AF3 891 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 KCNA1Q09470 495 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 CRHR2Q13324 411 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 TNFAIP1Q13829 316 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 HS1BP3Q53T59 392 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 XP32Q5T750 250 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 FBXO46Q6PJ61 603 aaPredicted RBP6.76□□□□□ -1.33
CMTM1-207ENST00000465057 NCAPG2Q86XI2 1143 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 MAP4K3Q8IVH8 894 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 ANKRD13AQ8IZ07 590 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 C1orf127Q8N9H9 656 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 CD99L2Q8TCZ2 262 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 ARHGAP45Q92619 1136 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 PMEPA1Q969W9 287 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 OPTNQ96CV9 577 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 PTPN18Q99952 460 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 PBX4Q9BYU1 374 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 USP44Q9H0E7 712 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 SIL1Q9H173 461 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 MUC3BQ9H195 1237 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 RASSF4Q9H2L5 321 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 SEMA6BQ9H3T3 888 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 SMC4Q9NTJ3 1288 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 TRIM17Q9Y577 477 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 DOCK1Q14185 1865 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 CDK5RAP2Q96SN8 1893 aa6.76□□□□□ -1.33
CMTM1-207ENST00000465057 DYNC1I1O14576 645 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 OFD1O75665 1012 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 ABL1P00519 1130 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 FGFR2P21802 821 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 CES1P23141 567 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 MCM5P33992 734 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 RFX5P48382 616 aaPredicted RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 INHBEP58166 350 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 VGLL4Q14135 290 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 SETDB1Q15047 1291 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 PUM3Q15397 648 aaKnown RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 PKN2Q16513 984 aaKnown RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 CAVIN4Q5BKX8 364 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 TEKT1Q969V4 418 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 HOOK2Q96ED9 719 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 KANSL3Q9P2N6 904 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 EGFL7Q9UHF1 273 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 PPME1Q9Y570 386 aa6.75□□□□□ -1.33
CMTM1-207ENST00000465057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
CMTM1-207ENST00000465057 CCL15-CCL14A0A0B4J2E2 113 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 PATL2C9JE40 543 aaKnown RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 EYA2O00167 538 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 FZD6O60353 706 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 IFIT1P09914 478 aaKnown RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 SLC5A1P13866 664 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 CAPN2P17655 700 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 ITGB7P26010 798 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 USP5P45974 858 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 TNNI2P48788 182 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 HDLBPQ00341 1268 aaKnown RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 EHHADHQ08426 723 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 CCL15Q16663 113 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 UTP14CQ5TAP6 766 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms