RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
APTX-213ENST00000465003 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 MFSD14CQ5VZR4 134 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 ARMC5Q96C12 935 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
APTX-213ENST00000465003 CDKL5O76039 1030 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
APTX-213ENST00000465003 CYBAP13498 195 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 CUL5Q93034 780 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
APTX-213ENST00000465003 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 PXMP2Q9NR77 195 aa13.65□□□□□ -0.22
APTX-213ENST00000465003 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
APTX-213ENST00000465003 SORBS3O60504 671 aa13.64□□□□□ -0.23
APTX-213ENST00000465003 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
APTX-213ENST00000465003 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
APTX-213ENST00000465003 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
APTX-213ENST00000465003 ZNF865P0CJ78 1059 aaPredicted RBP13.63□□□□□ -0.23
APTX-213ENST00000465003 ADCYAP1R1P41586 468 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 NLRP5P59047 1200 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 PGM5Q15124 567 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 RGS22Q8NE09 1264 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 UIMC1Q96RL1 719 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-213ENST00000465003 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
APTX-213ENST00000465003 RIC8AQ9NPQ8 531 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 ADD3Q9UEY8 706 aaKnown RBP13.63□□□□□ -0.23
APTX-213ENST00000465003 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 PDE4DQ08499 809 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 NPY5RQ15761 445 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
APTX-213ENST00000465003 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 ZMYND12Q9H0C1 365 aa13.63□□□□□ -0.23
APTX-213ENST00000465003 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
APTX-213ENST00000465003 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 NR3C2P08235 984 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 GHRHRQ02643 423 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 TRAF1Q13077 416 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 CCDC144BQ3MJ40 725 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
APTX-213ENST00000465003 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 FRMPD3Q5JV73 1810 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 ASB14A6NK59 587 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 EN2P19622 333 aaPredicted RBP13.62□□□□□ -0.23
APTX-213ENST00000465003 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
APTX-213ENST00000465003 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 COPS5Q92905 334 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
APTX-213ENST00000465003 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 RGS20O76081 388 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 ARIH2O95376 493 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 PGK1P00558 417 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 EDNRBP24530 442 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 NR5A1Q13285 461 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 CCDC148Q8NFR7 591 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 ABHD16BQ9H3Z7 469 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 PAK6Q9NQU5 681 aaPredicted RBP13.61□□□□□ -0.23
APTX-213ENST00000465003 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
APTX-213ENST00000465003 K7ELQ4 463 aaPredicted RBP13.6□□□□□ -0.23
APTX-213ENST00000465003 GJB2P29033 226 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 MCM2P49736 904 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 EARS2Q5JPH6 523 aaKnown RBP13.6□□□□□ -0.23
APTX-213ENST00000465003 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
APTX-213ENST00000465003 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 PKD2L1Q9P0L9 805 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 KIAA1217Q5T5P2 1943 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 SEPT4O43236 478 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 SMPD1P17405 629 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 LY6KQ17RY6 165 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 LHX8Q68G74 356 aa13.6□□□□□ -0.23
APTX-213ENST00000465003 KRT40Q6A162 431 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms