RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 OPLAHO14841 1288 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 PSMC6P62333 389 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 RIOX1Q9H6W3 641 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 ANO2Q9NQ90 1003 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 POLR3EQ9NVU0 708 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 PCDHA1Q9Y5I3 950 aa30.05■■■□□ 2.4
U2AF1-206ENST00000464750 LAMA2P24043 3122 aaKnown RBP30.05■■■□□ 2.4
U2AF1-206ENST00000464750 SLC27A2O14975 620 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 CD4P01730 458 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 TXNP10599 105 aaKnown RBP30.04■■■□□ 2.4
U2AF1-206ENST00000464750 TTLL4Q14679 1199 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 COPS5Q92905 334 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 PIGSQ96S52 555 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 SCN10AQ9Y5Y9 1956 aa30.04■■■□□ 2.4
U2AF1-206ENST00000464750 PRC1O43663 620 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 CYTH3O43739 400 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 ARIH2O95376 493 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 MYL3P08590 195 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 EIF2AK2P19525 551 aaKnown RBP30.03■■■□□ 2.4
U2AF1-206ENST00000464750 HSD17B4P51659 736 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 GHRHRQ02643 423 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 ARHGEF16Q5VV41 709 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 CASC1Q6TDU7 716 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 IWS1Q96ST2 819 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 SEZ6LQ9BYH1 1024 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 PPP1R12CQ9BZL4 782 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 LY9Q9HBG7 655 aa30.03■■■□□ 2.4
U2AF1-206ENST00000464750 GPHNQ9NQX3 736 aaPredicted RBP30.03■■■□□ 2.4
U2AF1-206ENST00000464750 PURAQ00577 322 aaKnown RBP30.02■■■□□ 2.4
U2AF1-206ENST00000464750 BRDTQ58F21 947 aaPredicted RBP30.02■■■□□ 2.4
U2AF1-206ENST00000464750 CREB3L3Q68CJ9 461 aa30.02■■■□□ 2.4
U2AF1-206ENST00000464750 MFSD5Q6N075 450 aa30.02■■■□□ 2.4
U2AF1-206ENST00000464750 RNPC3Q96LT9 517 aaKnown RBP30.02■■■□□ 2.4
U2AF1-206ENST00000464750 PXMP2Q9NR77 195 aa30.02■■■□□ 2.4
U2AF1-206ENST00000464750 STXBP2Q15833 593 aa30.01■■■□□ 2.39
U2AF1-206ENST00000464750 SEPT14Q6ZU15 432 aa30.01■■■□□ 2.39
U2AF1-206ENST00000464750 ZNF654Q8IZM8 581 aa30.01■■■□□ 2.39
U2AF1-206ENST00000464750 MTA3Q9BTC8 594 aa30.01■■■□□ 2.39
U2AF1-206ENST00000464750 DDAH1O94760 285 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 MCM5P33992 734 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 TRAF1Q13077 416 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 NECTIN1Q15223 517 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 CCDC62Q6P9F0 684 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 MTG1Q9BT17 334 aaPredicted RBP30■■■□□ 2.39
U2AF1-206ENST00000464750 MYL10Q9BUA6 226 aa30■■■□□ 2.39
U2AF1-206ENST00000464750 SH2B2O14492 632 aaPredicted RBP29.99■■■□□ 2.39
U2AF1-206ENST00000464750 PPIGQ13427 754 aaKnown RBP eCLIP29.99■■■□□ 2.39
U2AF1-206ENST00000464750 COL9A3Q14050 684 aaPredicted RBP29.99■■■□□ 2.39
U2AF1-206ENST00000464750 CTCFLQ8NI51 663 aaPredicted RBP29.99■■■□□ 2.39
U2AF1-206ENST00000464750 TRPV6Q9H1D0 765 aa29.99■■■□□ 2.39
U2AF1-206ENST00000464750 MTMR10Q9NXD2 777 aa29.99■■■□□ 2.39
U2AF1-206ENST00000464750 MAP3K20Q9NYL2 800 aaKnown RBP29.99■■■□□ 2.39
U2AF1-206ENST00000464750 PNMA6FA0A0J9YX94 578 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 A6NJR5 290 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 B4GALT4O60513 344 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 NR3C2P08235 984 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 HOXA13P31271 388 aaPredicted RBP29.98■■■□□ 2.39
U2AF1-206ENST00000464750 TMEM199Q8N511 208 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 TMEM87BQ96K49 555 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 MAP3K14Q99558 947 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 HIPK3Q9H422 1215 aa29.98■■■□□ 2.39
U2AF1-206ENST00000464750 CSF2RAP15509 400 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 CYP2C18P33260 490 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 LY6KQ17RY6 165 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 FAM109BQ6ICB4 259 aaPredicted RBP29.97■■■□□ 2.39
U2AF1-206ENST00000464750 NFXL1Q6ZNB6 911 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 SAMD3Q8N6K7 520 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 PIBF1Q8WXW3 757 aa29.97■■■□□ 2.39
U2AF1-206ENST00000464750 ALDH8A1Q9H2A2 487 aaPredicted RBP29.97■■■□□ 2.39
U2AF1-206ENST00000464750 KPNA6O60684 536 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 GH1P01241 217 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 KIF5BP33176 963 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.96■■■□□ 2.39
U2AF1-206ENST00000464750 PDCD2LQ9BRP1 358 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 MYH7BA7E2Y1 1941 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 UMODL1Q5DID0 1318 aa29.96■■■□□ 2.39
U2AF1-206ENST00000464750 CCDC69A6NI79 296 aa29.95■■■□□ 2.39
U2AF1-206ENST00000464750 GCOM1H8Y6P7 765 aaPredicted RBP29.95■■■□□ 2.39
U2AF1-206ENST00000464750 EIF3JO75822 258 aaKnown RBP29.95■■■□□ 2.39
U2AF1-206ENST00000464750 POLR2MP0CAP2 368 aa29.95■■■□□ 2.39
U2AF1-206ENST00000464750 SMAD3P84022 425 aaKnown RBP29.95■■■□□ 2.39
U2AF1-206ENST00000464750 ARHGAP1Q07960 439 aa29.95■■■□□ 2.39
U2AF1-206ENST00000464750 ZNF697Q5TEC3 545 aa29.95■■■□□ 2.39
U2AF1-206ENST00000464750 SPZ1Q9BXG8 430 aa29.95■■■□□ 2.39
U2AF1-206ENST00000464750 CDC45O75419 566 aa29.94■■■□□ 2.38
U2AF1-206ENST00000464750 RNF20Q5VTR2 975 aa29.94■■■□□ 2.38
U2AF1-206ENST00000464750 TMTC2Q8N394 836 aa29.94■■■□□ 2.38
U2AF1-206ENST00000464750 AFG1LQ8WV93 481 aa29.94■■■□□ 2.38
U2AF1-206ENST00000464750 NOC4LQ9BVI4 516 aaKnown RBP29.94■■■□□ 2.38
U2AF1-206ENST00000464750 TRMT13Q9NUP7 481 aaKnown RBP29.94■■■□□ 2.38
U2AF1-206ENST00000464750 MRVI1Q9Y6F6 885 aa29.94■■■□□ 2.38
U2AF1-206ENST00000464750 MMP3P08254 477 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 MYCLP12524 364 aaPredicted RBP29.93■■■□□ 2.38
U2AF1-206ENST00000464750 LIFRP42702 1097 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 PGM5Q15124 567 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 NBPF20Q3BBV1 942 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 FAM47CQ5HY64 1035 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 CCDC136Q96JN2 1154 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 LRRC2Q9BYS8 371 aa29.93■■■□□ 2.38
U2AF1-206ENST00000464750 COL6A3P12111 3177 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms