RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 TLK2Q86UE8 772 aa25.67■■□□□ 1.7
UBA3-206ENST00000464605 NSUN6Q8TEA1 469 aaKnown RBP25.67■■□□□ 1.7
UBA3-206ENST00000464605 RMDN3Q96TC7 470 aa25.67■■□□□ 1.7
UBA3-206ENST00000464605 USP26Q9BXU7 913 aa25.67■■□□□ 1.7
UBA3-206ENST00000464605 MAP3K20Q9NYL2 800 aaKnown RBP25.67■■□□□ 1.7
UBA3-206ENST00000464605 DYNC1LI2O43237 492 aaPredicted RBP25.66■■□□□ 1.7
UBA3-206ENST00000464605 ASGR1P07306 291 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 HMGB1P09429 215 aaKnown RBP25.66■■□□□ 1.7
UBA3-206ENST00000464605 BEX3Q00994 111 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 TRIM60Q495X7 471 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 GNASQ5JWF2 1037 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 TMTC3Q6ZXV5 915 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 SAMD3Q8N6K7 520 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 JAKMIP1Q96N16 626 aaKnown RBP25.66■■□□□ 1.7
UBA3-206ENST00000464605 WDR11Q9BZH6 1224 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 SPC25Q9HBM1 224 aa25.66■■□□□ 1.7
UBA3-206ENST00000464605 HOXA13P31271 388 aaPredicted RBP25.65■■□□□ 1.7
UBA3-206ENST00000464605 TRAF1Q13077 416 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 NOL8Q76FK4 1167 aaKnown RBP25.65■■□□□ 1.7
UBA3-206ENST00000464605 MICU3Q86XE3 530 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 PCSK9Q8NBP7 692 aaKnown RBP25.65■■□□□ 1.7
UBA3-206ENST00000464605 RRP36Q96EU6 259 aaKnown RBP25.65■■□□□ 1.7
UBA3-206ENST00000464605 LRCH3Q96II8 777 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 IWS1Q96ST2 819 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 PXMP2Q9NR77 195 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 ATP11BQ9Y2G3 1177 aa25.65■■□□□ 1.7
UBA3-206ENST00000464605 MPHOSPH6Q99547 160 aaKnown RBP25.64■■□□□ 1.7
UBA3-206ENST00000464605 LAMA2P24043 3122 aaKnown RBP25.64■■□□□ 1.69
UBA3-206ENST00000464605 B4DLN1 442 aa25.63■■□□□ 1.69
UBA3-206ENST00000464605 ARIH2O95376 493 aa25.63■■□□□ 1.69
UBA3-206ENST00000464605 MRPL12P52815 198 aaKnown RBP25.63■■□□□ 1.69
UBA3-206ENST00000464605 FSCN1Q16658 493 aaKnown RBP25.63■■□□□ 1.69
UBA3-206ENST00000464605 AP5M1Q9H0R1 490 aa25.63■■□□□ 1.69
UBA3-206ENST00000464605 STARD7Q9NQZ5 370 aa25.63■■□□□ 1.69
UBA3-206ENST00000464605 FAM217BQ9NTX9 383 aaPredicted RBP25.63■■□□□ 1.69
UBA3-206ENST00000464605 ELP1O95163 1332 aa25.63■■□□□ 1.69
UBA3-206ENST00000464605 NR3C2P08235 984 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 EIF2AK2P19525 551 aaKnown RBP25.62■■□□□ 1.69
UBA3-206ENST00000464605 TLE2Q04725 743 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 FUT2Q10981 343 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 ARHGEF16Q5VV41 709 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 CCDC62Q6P9F0 684 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 Q6ZUG5 572 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 TDHQ8IZJ6 230 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 FBXL16Q8N461 479 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 CCDC82Q8N4S0 544 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 SCFD2Q8WU76 684 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 PDCD2LQ9BRP1 358 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 AGXT2Q9BYV1 514 aa25.62■■□□□ 1.69
UBA3-206ENST00000464605 KLF18A0A0U1RQI7 1052 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 hCG_1642624A0A1W2PR95 340 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 GCOM1H8Y6P7 765 aaPredicted RBP25.61■■□□□ 1.69
UBA3-206ENST00000464605 ZBTB43O43298 467 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 POLR2MP0CAP2 368 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 RPS6KB1P23443 525 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 CDK7P50613 346 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 STXBP2Q15833 593 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 LRIT3Q3SXY7 679 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 BLOC1S2Q6QNY1 142 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 SYNE3Q6ZMZ3 975 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 COPS5Q92905 334 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 GLT1D1Q96MS3 346 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 UBE2OQ9C0C9 1292 aaKnown RBP25.61■■□□□ 1.69
UBA3-206ENST00000464605 SCN10AQ9Y5Y9 1956 aa25.61■■□□□ 1.69
UBA3-206ENST00000464605 ANKRD33Q7Z3H0 272 aa25.6■■□□□ 1.69
UBA3-206ENST00000464605 SH3RF1Q7Z6J0 888 aa25.6■■□□□ 1.69
UBA3-206ENST00000464605 IL31RAQ8NI17 732 aa25.6■■□□□ 1.69
UBA3-206ENST00000464605 PDLIM7Q9NR12 457 aa25.6■■□□□ 1.69
UBA3-206ENST00000464605 CNTNAP5Q8WYK1 1306 aa25.6■■□□□ 1.69
UBA3-206ENST00000464605 EIF3JO75822 258 aaKnown RBP25.59■■□□□ 1.69
UBA3-206ENST00000464605 RGS20O76081 388 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 TXNP10599 105 aaKnown RBP25.59■■□□□ 1.69
UBA3-206ENST00000464605 CDC27P30260 824 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 RCAN1P53805 252 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 APOBRQ0VD83 1088 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 PPP2R5BQ15173 497 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 RTN1Q16799 776 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 CXCL17Q6UXB2 119 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 VSIG10LQ86VR7 867 aa25.59■■□□□ 1.69
UBA3-206ENST00000464605 RBM28Q9NW13 759 aaKnown RBP25.59■■□□□ 1.69
UBA3-206ENST00000464605 SEC63Q9UGP8 760 aaKnown RBP25.59■■□□□ 1.69
UBA3-206ENST00000464605 TRIM43BA6NCK2 446 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 MEIS2O14770 477 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 NKRFO15226 690 aaKnown RBP eCLIP25.58■■□□□ 1.69
UBA3-206ENST00000464605 CASTP20810 708 aaKnown RBP25.58■■□□□ 1.69
UBA3-206ENST00000464605 MDM2Q00987 491 aaPredicted RBP25.58■■□□□ 1.69
UBA3-206ENST00000464605 TTLL4Q14679 1199 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 PGM5Q15124 567 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 SEPT14Q6ZU15 432 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 FCHSD1Q86WN1 690 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 BRF1Q92994 677 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 TRIM43Q96BQ3 446 aaPredicted RBP25.58■■□□□ 1.69
UBA3-206ENST00000464605 TOX2Q96NM4 488 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 ZSWIM6Q9HCJ5 1215 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 GRIN2DO15399 1336 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 FRMPD4Q14CM0 1322 aa25.58■■□□□ 1.69
UBA3-206ENST00000464605 PSMA5P28066 241 aa25.57■■□□□ 1.68
UBA3-206ENST00000464605 GPR153Q6NV75 609 aa25.57■■□□□ 1.68
UBA3-206ENST00000464605 SLC43A3Q8NBI5 491 aa25.57■■□□□ 1.68
UBA3-206ENST00000464605 OR6J1Q8NGC5 347 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms