RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 HSP90AB1P08238 724 aaKnown RBP7.17□□□□□ -1.26
CD46-211ENST00000464082 NFKB2Q00653 900 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 LRFN4Q6PJG9 635 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 TPTE2Q6XPS3 522 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 ELMO3Q96BJ8 720 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 CITED4Q96RK1 184 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 SGPP1Q9BX95 441 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
CD46-211ENST00000464082 DLEC1Q9Y238 1755 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 ARFGEF1Q9Y6D6 1849 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
CD46-211ENST00000464082 SCN7AQ01118 1682 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 SBF1O95248 1867 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 CCDC88AQ3V6T2 1871 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
CD46-211ENST00000464082 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 PRRT2Q7Z6L0 340 aaPredicted RBP7.16□□□□□ -1.26
CD46-211ENST00000464082 MFSD2AQ8NA29 543 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 C3orf58Q8NDZ4 430 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 XAGE3Q8WTP9 111 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 PHACTR3Q96KR7 559 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 RTEL1Q9NZ71 1219 aa7.16□□□□□ -1.26
CD46-211ENST00000464082 PPP1R1BQ9UD71 204 aaPredicted RBP7.16□□□□□ -1.26
CD46-211ENST00000464082 CACNA1SQ13698 1873 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 PTPN11Q06124 597 aaPredicted RBP7.15□□□□□ -1.26
CD46-211ENST00000464082 C1orf141Q5JVX7 400 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 LLGL2Q6P1M3 1020 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 TMPRSS7Q7RTY8 843 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 CREG2Q8IUH2 290 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 IL17REQ8NFR9 667 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 XYLT2Q9H1B5 865 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 SLC52A2Q9HAB3 445 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 KCTD3Q9Y597 815 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 CEMIPQ8WUJ3 1361 aa7.15□□□□□ -1.26
CD46-211ENST00000464082 FBXO24O75426 580 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 NUP98P52948 1817 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 SLC39A6Q13433 755 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 SSPNQ14714 243 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 NLGN2Q8NFZ4 835 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 CXorf38Q8TB03 319 aa7.14□□□□□ -1.27
CD46-211ENST00000464082 U2SURPO15042 1029 aaKnown RBP7.13□□□□□ -1.27
CD46-211ENST00000464082 PEX10O60683 326 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 SEMA7AO75326 666 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 PRKAR2BP31323 418 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 CAP2P40123 477 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
CD46-211ENST00000464082 PRAMEF13Q5VWM6 474 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 IRF2BP1Q8IU81 584 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 ALKBH8Q96BT7 664 aaKnown RBP7.13□□□□□ -1.27
CD46-211ENST00000464082 PLPPR2Q96GM1 343 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 WNT10AQ9GZT5 417 aa7.13□□□□□ -1.27
CD46-211ENST00000464082 COL11A2P13942 1736 aaPredicted RBP7.13□□□□□ -1.27
CD46-211ENST00000464082 OTOL1A6NHN0 477 aaPredicted RBP7.12□□□□□ -1.27
CD46-211ENST00000464082 RPS6KA4O75676 772 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 CRKLP46109 303 aaKnown RBP7.12□□□□□ -1.27
CD46-211ENST00000464082 ZNF385BQ569K4 471 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.12□□□□□ -1.27
CD46-211ENST00000464082 DNAJC10Q8IXB1 793 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 PANK1Q8TE04 598 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 PLEKHF1Q96S99 279 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 ZNF552Q9H707 407 aaPredicted RBP7.12□□□□□ -1.27
CD46-211ENST00000464082 ARFGEF2Q9Y6D5 1785 aa7.12□□□□□ -1.27
CD46-211ENST00000464082 PXDNLA1KZ92 1463 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 C10orf71Q711Q0 1435 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 SOS1Q07889 1333 aaPredicted RBP7.11□□□□□ -1.27
CD46-211ENST00000464082 TEX51A0A1B0GUA7 166 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 KCNQ3O43525 872 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 ZGLP1P0C6A0 271 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 CYP19A1P11511 503 aaPredicted RBP7.11□□□□□ -1.27
CD46-211ENST00000464082 GYS1P13807 737 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 POLD1P28340 1107 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 KIR3DL1P43629 444 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 CDK8P49336 464 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 ZNF746Q6NUN9 644 aaPredicted RBP7.11□□□□□ -1.27
CD46-211ENST00000464082 PDZD8Q8NEN9 1154 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 INTS4Q96HW7 963 aaKnown RBP7.11□□□□□ -1.27
CD46-211ENST00000464082 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
CD46-211ENST00000464082 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
CD46-211ENST00000464082 HEG1Q9ULI3 1381 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 USP42Q9H9J4 1324 aaKnown RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 DICER1Q9UPY3 1922 aaKnown RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 CST3P01034 146 aaPredicted RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 U2AF1L5P0DN76 240 aaPredicted RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 HMGB2P26583 209 aaKnown RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 TPP2P29144 1249 aaPredicted RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 ETF1P62495 437 aaKnown RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 U2AF1Q01081 240 aaKnown RBP eCLIP7.1□□□□□ -1.271e-6■□□□□ 9.4
CD46-211ENST00000464082 DDX10Q13206 875 aaKnown RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 LRRC14Q15048 493 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 GAB4Q2WGN9 574 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 HID1Q8IV36 788 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 ZNF496Q96IT1 587 aaPredicted RBP7.1□□□□□ -1.27
CD46-211ENST00000464082 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 DMRTB1Q96MA1 342 aa7.1□□□□□ -1.27
CD46-211ENST00000464082 SRP68Q9UHB9 627 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms